RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 SETD7Q8WTS6 366 aaKnown RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 ARSGQ96EG1 525 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 NEDD4LQ96PU5 975 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 PHOX2BQ99453 314 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 SPATA5L1Q9BVQ7 753 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 ANKHQ9HCJ1 492 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 ADAP2Q9NPF8 381 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 SNX7Q9UNH6 387 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 GSTK1Q9Y2Q3 226 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 TAF1P21675 1872 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 CACNA1IQ9P0X4 2223 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 HEPACAM2A8MVW5 462 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 LRRTM2O43300 516 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 LCMT2O60294 686 aaKnown RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 UGDHO60701 494 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 SCGB2A1O75556 95 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 GCM2O75603 506 aaPredicted RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 TSPAN9O75954 239 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 RAB36O95755 333 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 SRPRAP08240 638 aaKnown RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 ADRB3P13945 408 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 SOX3P41225 446 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 XCR1P46094 333 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 CXCR4P61073 352 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 BIKQ13323 160 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 LASP1Q14847 261 aaKnown RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 TBCEQ15813 527 aaPredicted RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 MPP7Q5T2T1 576 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 HENMT1Q5T8I9 393 aaKnown RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 FCRLBQ6BAA4 426 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 ENPP7Q6UWV6 458 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 DNAJC22Q8N4W6 341 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 AMER3Q8N944 861 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 OR52E4Q8NGH9 312 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 OR2L2Q8NH16 312 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 PIGXQ8TBF5 258 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 RGMAQ96B86 450 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 SAT2Q96F10 170 aaPredicted RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 ZC3HAV1LQ96H79 300 aaKnown RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 LMLNQ96KR4 655 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 DEPDC7Q96QD5 511 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 EGLN3Q9H6Z9 239 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 METTL8Q9H825 291 aaKnown RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 RABL2AQ9UBK7 228 aaPredicted RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 NEUROG3Q9Y4Z2 214 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 ECM29Q5VYK3 1845 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 CCDC182A6NF36 153 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 PIP5K1CO60331 668 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 TNFRSF21O75509 655 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 CAV3P56539 151 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 SLC35F1Q5T1Q4 408 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 LCN1P1Q5VSP4 162 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 GDPD3Q7L5L3 318 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 DGLUCYQ7Z3D6 616 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 MOSPD2Q8NHP6 518 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 PMM1Q92871 262 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 MCCC1Q96RQ3 725 aaPredicted RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 COQ7Q99807 217 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 TTYH2Q9BSA4 534 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 ACER3Q9NUN7 267 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF624Q9P2J8 865 aaPredicted RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 EDDM13A0A1B0GTR0 161 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 CXCL10P02778 98 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 GNSP15586 552 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 SOX9P48436 509 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 PRMT2P55345 433 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 CLDN2P57739 230 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 IL18Q14116 193 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 HSDL2Q6YN16 418 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 TMC8Q8IU68 726 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 GALNT12Q8IXK2 581 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 FAM98AQ8NCA5 519 aaKnown RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.67□□□□□ -1.664e-7■■□□□ 12.4
SMAD4-202ENST00000398417 CHAC2Q8WUX2 184 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 UFD1Q92890 307 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF566Q969W8 418 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 NELL2Q99435 816 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 OR51V1Q9H2C8 321 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 CNIH4Q9P003 139 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 FBXO9Q9UK97 447 aaPredicted RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF780BQ9Y6R6 833 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 MED12Q93074 2177 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 WDFY3Q8IZQ1 3526 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 A0A1W2PP55 124 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 IGHA2P01877 340 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 APODP05090 189 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 MRPL3P09001 348 aaKnown RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 CCR8P51685 355 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 SPHARQ15513 63 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 UNC5DQ6UXZ4 953 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 ADGRD2Q7Z7M1 963 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 LACC1Q8IV20 430 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 DCUN1D3Q8IWE4 304 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 UBTD1Q9HAC8 227 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 SEC14L4Q9UDX3 406 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 NUFIP1Q9UHK0 495 aaKnown RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 BOLA1Q9Y3E2 137 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 CENPXA8MT69 81 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 TMPRSS11DO60235 418 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 GUCY1B2O75343 617 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms