RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 A4GNTQ9UNA3 340 aa12.98□□□□□ -0.33
COL6A2-203ENST00000397763 MYO15AQ9UKN7 3530 aa12.98□□□□□ -0.33
COL6A2-203ENST00000397763 SCN3AQ9NY46 2000 aa12.98□□□□□ -0.33
COL6A2-203ENST00000397763 TGM5O43548 720 aa12.98□□□□□ -0.33
COL6A2-203ENST00000397763 TMPRSS11DO60235 418 aa12.98□□□□□ -0.33
COL6A2-203ENST00000397763 SLC2A10O95528 541 aa12.98□□□□□ -0.33
COL6A2-203ENST00000397763 CCT3P49368 545 aaKnown RBP12.98□□□□□ -0.33
COL6A2-203ENST00000397763 SNRPGP62308 76 aaKnown RBP12.98□□□□□ -0.33
COL6A2-203ENST00000397763 C12orf73Q69YU5 71 aa12.98□□□□□ -0.33
COL6A2-203ENST00000397763 LIPIQ6XZB0 460 aa12.98□□□□□ -0.33
COL6A2-203ENST00000397763 KIF18BQ86Y91 864 aa12.98□□□□□ -0.33
COL6A2-203ENST00000397763 RDH10Q8IZV5 341 aa12.98□□□□□ -0.33
COL6A2-203ENST00000397763 ANKRD53Q8N9V6 530 aa12.98□□□□□ -0.33
COL6A2-203ENST00000397763 BBS1Q8NFJ9 593 aa12.98□□□□□ -0.33
COL6A2-203ENST00000397763 OR9A1PQ8NGU1 263 aa12.98□□□□□ -0.33
COL6A2-203ENST00000397763 UPRTQ96BW1 309 aa12.98□□□□□ -0.33
COL6A2-203ENST00000397763 PPIL3Q9H2H8 161 aaKnown RBP12.98□□□□□ -0.33
COL6A2-203ENST00000397763 TDP1Q9NUW8 608 aa12.98□□□□□ -0.33
COL6A2-203ENST00000397763 KCND3Q9UK17 655 aa12.98□□□□□ -0.33
COL6A2-203ENST00000397763 PPIL1Q9Y3C6 166 aa12.98□□□□□ -0.33
COL6A2-203ENST00000397763 KCNE3Q9Y6H6 103 aa12.98□□□□□ -0.33
COL6A2-203ENST00000397763 CPSF4LA6NMK7 179 aaKnown RBP12.97□□□□□ -0.33
COL6A2-203ENST00000397763 PDPK1O15530 556 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 MMP20O60882 483 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 POP7O75817 140 aaKnown RBP12.97□□□□□ -0.33
COL6A2-203ENST00000397763 RAB36O95755 333 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 UBL4AP11441 157 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 ALAS2P22557 587 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 ATP6V1E1P36543 226 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 PRLHRP49683 370 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 TPGS2Q68CL5 300 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 MTFR2Q6P444 385 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 SLC9B2Q86UD5 537 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 TRAM1L1Q8N609 369 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 SLC37A3Q8NCC5 494 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 OR6C4Q8NGE1 309 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 C16orf58Q96GQ5 468 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 MSANTD3Q96H12 275 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 SENP5Q96HI0 755 aaPredicted RBP12.97□□□□□ -0.33
COL6A2-203ENST00000397763 CPEB1Q9BZB8 566 aaKnown RBP12.97□□□□□ -0.33
COL6A2-203ENST00000397763 FZD3Q9NPG1 666 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 MGAT4BQ9UQ53 548 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 GTPBP1O00178 669 aaKnown RBP12.97□□□□□ -0.33
COL6A2-203ENST00000397763 OLFM2O95897 454 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 LRG1P02750 347 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 SYPP08247 313 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 NR2F6P10588 404 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 ATF4P18848 351 aaPredicted RBP12.97□□□□□ -0.33
COL6A2-203ENST00000397763 SLC6A11P48066 632 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 SLC9A3P48764 834 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 LASP1Q14847 261 aaKnown RBP12.97□□□□□ -0.33
COL6A2-203ENST00000397763 LHX8Q68G74 356 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 XKRXQ6PP77 449 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 MARCH9Q86YJ5 346 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 DNAJC5GQ8N7S2 189 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 OR8D4Q8NGM9 314 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 TM4SF18Q96CE8 201 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 FAM46AQ96IP4 442 aaKnown RBP12.97□□□□□ -0.33
COL6A2-203ENST00000397763 ZSCAN5AQ9BUG6 496 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 EFCAB11Q9BUY7 163 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 HDHD2Q9H0R4 259 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 ZNF222Q9UK12 451 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 MAPRE3Q9UPY8 281 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 CLCA2Q9UQC9 943 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 PDE9AO76083 593 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 HOXB3P14651 431 aaPredicted RBP12.97□□□□□ -0.33
COL6A2-203ENST00000397763 PNLIPRP1P54315 467 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 NTHL1P78549 312 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 CSTF1Q05048 431 aaKnown RBP12.97□□□□□ -0.33
COL6A2-203ENST00000397763 PRAMEF14Q5SWL7 426 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 FAM27D1Q5T7N8 215 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 PRAMEF13Q5VWM6 474 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 ZNF547Q8IVP9 402 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 TMEM145Q8NBT3 493 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 KAT2AQ92830 837 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 LMLNQ96KR4 655 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 MAGEB10Q96LZ2 347 aaPredicted RBP12.97□□□□□ -0.33
COL6A2-203ENST00000397763 TTTY10Q9BZA0 68 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 CDCP1Q9H5V8 836 aa12.97□□□□□ -0.33
COL6A2-203ENST00000397763 ZCCHC3Q9NUD5 404 aaKnown RBP12.97□□□□□ -0.33
COL6A2-203ENST00000397763 IQCMA0A1B0GVH7 501 aa12.96□□□□□ -0.33
COL6A2-203ENST00000397763 FAAHO00519 579 aa12.96□□□□□ -0.33
COL6A2-203ENST00000397763 LZTS3O60299 673 aaPredicted RBP12.96□□□□□ -0.33
COL6A2-203ENST00000397763 PIPP12273 146 aaPredicted RBP12.96□□□□□ -0.33
COL6A2-203ENST00000397763 ITGB7P26010 798 aa12.96□□□□□ -0.33
COL6A2-203ENST00000397763 KCNJ5P48544 419 aa12.96□□□□□ -0.33
COL6A2-203ENST00000397763 WNT4P56705 351 aa12.96□□□□□ -0.33
COL6A2-203ENST00000397763 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.96□□□□□ -0.33
COL6A2-203ENST00000397763 RAB33AQ14088 237 aa12.96□□□□□ -0.33
COL6A2-203ENST00000397763 POU4F3Q15319 338 aa12.96□□□□□ -0.33
COL6A2-203ENST00000397763 ZNF697Q5TEC3 545 aa12.96□□□□□ -0.33
COL6A2-203ENST00000397763 FAM205BPQ63HN1 556 aa12.96□□□□□ -0.33
COL6A2-203ENST00000397763 PARS2Q7L3T8 475 aaKnown RBP12.96□□□□□ -0.33
COL6A2-203ENST00000397763 CDH24Q86UP0 819 aa12.96□□□□□ -0.33
COL6A2-203ENST00000397763 SMPDL3AQ92484 453 aa12.96□□□□□ -0.33
COL6A2-203ENST00000397763 ZNF354BQ96LW1 612 aa12.96□□□□□ -0.33
COL6A2-203ENST00000397763 C17orf62Q9BQA9 187 aa12.96□□□□□ -0.33
COL6A2-203ENST00000397763 XKR8Q9H6D3 395 aa12.96□□□□□ -0.33
COL6A2-203ENST00000397763 SIRT3Q9NTG7 399 aaPredicted RBP12.96□□□□□ -0.33
COL6A2-203ENST00000397763 ENOPH1Q9UHY7 261 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms