RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 GOLM1Q8NBJ4 401 aa23.41■■□□□ 1.34
TSPAN4-207ENST00000397411 C17orf47Q8NEP4 570 aa23.41■■□□□ 1.34
TSPAN4-207ENST00000397411 ELP4Q96EB1 424 aa23.41■■□□□ 1.34
TSPAN4-207ENST00000397411 HSPBAP1Q96EW2 488 aa23.41■■□□□ 1.34
TSPAN4-207ENST00000397411 NXF5Q9H1B4 397 aaKnown RBP23.41■■□□□ 1.34
TSPAN4-207ENST00000397411 WDR55Q9H6Y2 383 aaPredicted RBP23.41■■□□□ 1.34
TSPAN4-207ENST00000397411 SACM1LQ9NTJ5 587 aa23.41■■□□□ 1.34
TSPAN4-207ENST00000397411 ACSS1Q9NUB1 689 aaPredicted RBP23.41■■□□□ 1.34
TSPAN4-207ENST00000397411 DTX4Q9Y2E6 619 aa23.41■■□□□ 1.34
TSPAN4-207ENST00000397411 SHANK1Q9Y566 2161 aa23.41■■□□□ 1.34
TSPAN4-207ENST00000397411 A0A087WV62 115 aa23.4■■□□□ 1.34
TSPAN4-207ENST00000397411 A0A1W2PRB8 838 aa23.4■■□□□ 1.34
TSPAN4-207ENST00000397411 TCP11X1B4DZS4 312 aa23.4■■□□□ 1.34
TSPAN4-207ENST00000397411 PLOD2O00469 737 aa23.4■■□□□ 1.34
TSPAN4-207ENST00000397411 TP53I11O14683 189 aa23.4■■□□□ 1.34
TSPAN4-207ENST00000397411 FBXO45P0C2W1 286 aa23.4■■□□□ 1.34
TSPAN4-207ENST00000397411 LAMP1P11279 417 aa23.4■■□□□ 1.34
TSPAN4-207ENST00000397411 CNR1P21554 472 aa23.4■■□□□ 1.34
TSPAN4-207ENST00000397411 DRD5P21918 477 aa23.4■■□□□ 1.34
TSPAN4-207ENST00000397411 EPHA3P29320 983 aa23.4■■□□□ 1.34
TSPAN4-207ENST00000397411 SOX18P35713 384 aa23.4■■□□□ 1.34
TSPAN4-207ENST00000397411 DIO3P55073 304 aa23.4■■□□□ 1.34
TSPAN4-207ENST00000397411 GPR85P60893 370 aa23.4■■□□□ 1.34
TSPAN4-207ENST00000397411 LARP4Q71RC2 724 aaKnown RBP eCLIP23.4■■□□□ 1.342e-6■■■■■ 32.5
TSPAN4-207ENST00000397411 NR4A3Q92570 626 aa23.4■■□□□ 1.34
TSPAN4-207ENST00000397411 C7orf26Q96N11 449 aa23.4■■□□□ 1.34
TSPAN4-207ENST00000397411 C3orf14Q9HBI5 128 aa23.4■■□□□ 1.34
TSPAN4-207ENST00000397411 C19orf53Q9UNZ5 99 aaPredicted RBP23.4■■□□□ 1.34
TSPAN4-207ENST00000397411 EML6Q6ZMW3 1958 aa23.4■■□□□ 1.34
TSPAN4-207ENST00000397411 ACOX3O15254 700 aa23.39■■□□□ 1.33
TSPAN4-207ENST00000397411 EFNA1P20827 205 aaPredicted RBP23.39■■□□□ 1.33
TSPAN4-207ENST00000397411 GNLYP22749 145 aa23.39■■□□□ 1.33
TSPAN4-207ENST00000397411 PRKAG1P54619 331 aa23.39■■□□□ 1.33
TSPAN4-207ENST00000397411 RPP38P78345 283 aaKnown RBP23.39■■□□□ 1.33
TSPAN4-207ENST00000397411 SRSF11Q05519 484 aaKnown RBP23.39■■□□□ 1.33
TSPAN4-207ENST00000397411 ZNF155Q12901 538 aaPredicted RBP23.39■■□□□ 1.33
TSPAN4-207ENST00000397411 RPS6KA2Q15349 733 aa23.39■■□□□ 1.33
TSPAN4-207ENST00000397411 LSM12Q3MHD2 195 aaKnown RBP23.39■■□□□ 1.33
TSPAN4-207ENST00000397411 FAM47EQ6ZV65 393 aa23.39■■□□□ 1.33
TSPAN4-207ENST00000397411 SZRD1Q7Z422 152 aa23.39■■□□□ 1.33
TSPAN4-207ENST00000397411 CPSF7Q8N684 471 aaKnown RBP23.39■■□□□ 1.33
TSPAN4-207ENST00000397411 POGLUT1Q8NBL1 392 aa23.39■■□□□ 1.33
TSPAN4-207ENST00000397411 CKAP2Q8WWK9 683 aa23.39■■□□□ 1.33
TSPAN4-207ENST00000397411 MAGEB18Q96M61 343 aa23.39■■□□□ 1.33
TSPAN4-207ENST00000397411 FOLH1BQ9HBA9 442 aa23.39■■□□□ 1.33
TSPAN4-207ENST00000397411 NBASA2RRP1 2371 aa23.38■■□□□ 1.33
TSPAN4-207ENST00000397411 G3V3Y1 287 aa23.38■■□□□ 1.33
TSPAN4-207ENST00000397411 CFLARO15519 480 aa23.38■■□□□ 1.33
TSPAN4-207ENST00000397411 NME6O75414 186 aaPredicted RBP23.38■■□□□ 1.33
TSPAN4-207ENST00000397411 ERN1O75460 977 aaKnown RBP23.38■■□□□ 1.33
TSPAN4-207ENST00000397411 EDN3P14138 238 aa23.38■■□□□ 1.33
TSPAN4-207ENST00000397411 KRT20P35900 424 aa23.38■■□□□ 1.33
TSPAN4-207ENST00000397411 PLGLB1Q02325 96 aa23.38■■□□□ 1.33
TSPAN4-207ENST00000397411 PLCXD2Q0VAA5 305 aa23.38■■□□□ 1.33
TSPAN4-207ENST00000397411 ZNHIT3Q15649 155 aaPredicted RBP23.38■■□□□ 1.33
TSPAN4-207ENST00000397411 FHL5Q5TD97 284 aa23.38■■□□□ 1.33
TSPAN4-207ENST00000397411 LYPD8Q6UX82 237 aa23.38■■□□□ 1.33
TSPAN4-207ENST00000397411 CEP70Q8NHQ1 597 aa23.38■■□□□ 1.33
TSPAN4-207ENST00000397411 BARD1Q99728 777 aaKnown RBP23.38■■□□□ 1.33
TSPAN4-207ENST00000397411 DUSP26Q9BV47 211 aa23.38■■□□□ 1.33
TSPAN4-207ENST00000397411 SLCO1B3Q9NPD5 702 aa23.38■■□□□ 1.33
TSPAN4-207ENST00000397411 CNIH4Q9P003 139 aa23.38■■□□□ 1.33
TSPAN4-207ENST00000397411 OR10H1Q9Y4A9 318 aa23.38■■□□□ 1.33
TSPAN4-207ENST00000397411 USH1CQ9Y6N9 552 aa23.38■■□□□ 1.33
TSPAN4-207ENST00000397411 SVILO95425 2214 aa23.37■■□□□ 1.33
TSPAN4-207ENST00000397411 RP1L1Q8IWN7 2480 aaPredicted RBP23.37■■□□□ 1.33
TSPAN4-207ENST00000397411 ASPDHA6ND91 283 aa23.37■■□□□ 1.33
TSPAN4-207ENST00000397411 ANKUB1A6NFN9 424 aa23.37■■□□□ 1.33
TSPAN4-207ENST00000397411 UPK1AO00322 258 aa23.37■■□□□ 1.33
TSPAN4-207ENST00000397411 DIAPH2O60879 1101 aa23.37■■□□□ 1.33
TSPAN4-207ENST00000397411 CCL3P10147 92 aa23.37■■□□□ 1.33
TSPAN4-207ENST00000397411 ABCD3P28288 659 aa23.37■■□□□ 1.33
TSPAN4-207ENST00000397411 FBXW4P57775 412 aa23.37■■□□□ 1.33
TSPAN4-207ENST00000397411 NTRK2Q16620 822 aa23.37■■□□□ 1.33
TSPAN4-207ENST00000397411 OGFOD2Q6N063 350 aa23.37■■□□□ 1.33
TSPAN4-207ENST00000397411 SLC44A2Q8IWA5 706 aaPredicted RBP23.37■■□□□ 1.33
TSPAN4-207ENST00000397411 RIMKLAQ8IXN7 391 aa23.37■■□□□ 1.33
TSPAN4-207ENST00000397411 ARFGAP2Q8N6H7 521 aa23.37■■□□□ 1.33
TSPAN4-207ENST00000397411 OR10G3Q8NGC4 313 aa23.37■■□□□ 1.33
TSPAN4-207ENST00000397411 NUDT8Q8WV74 236 aa23.37■■□□□ 1.33
TSPAN4-207ENST00000397411 OR5P2Q8WZ92 322 aa23.37■■□□□ 1.33
TSPAN4-207ENST00000397411 COQ8BQ96D53 544 aa23.37■■□□□ 1.33
TSPAN4-207ENST00000397411 FRMD6Q96NE9 622 aa23.37■■□□□ 1.33
TSPAN4-207ENST00000397411 FAM173AQ9BQD7 235 aa23.37■■□□□ 1.33
TSPAN4-207ENST00000397411 BHLHE41Q9C0J9 482 aaPredicted RBP23.37■■□□□ 1.33
TSPAN4-207ENST00000397411 GPR55Q9Y2T6 319 aaPredicted RBP23.37■■□□□ 1.33
TSPAN4-207ENST00000397411 FRG2CA6NGY1 282 aa23.36■■□□□ 1.33
TSPAN4-207ENST00000397411 EMC8O43402 210 aa23.36■■□□□ 1.33
TSPAN4-207ENST00000397411 REM1O75628 298 aa23.36■■□□□ 1.33
TSPAN4-207ENST00000397411 CBX6O95503 412 aa23.36■■□□□ 1.33
TSPAN4-207ENST00000397411 ZNF24P17028 368 aa23.36■■□□□ 1.33
TSPAN4-207ENST00000397411 NAGAP17050 411 aa23.36■■□□□ 1.33
TSPAN4-207ENST00000397411 RFC3P40938 356 aa23.36■■□□□ 1.33
TSPAN4-207ENST00000397411 FRKP42685 505 aaPredicted RBP23.36■■□□□ 1.33
TSPAN4-207ENST00000397411 CDK9P50750 372 aaKnown RBP23.36■■□□□ 1.33
TSPAN4-207ENST00000397411 NME5P56597 212 aa23.36■■□□□ 1.33
TSPAN4-207ENST00000397411 MRPL49Q13405 166 aaKnown RBP23.36■■□□□ 1.33
TSPAN4-207ENST00000397411 SLC9B1Q4ZJI4 515 aa23.36■■□□□ 1.33
TSPAN4-207ENST00000397411 GK5Q6ZS86 529 aa23.36■■□□□ 1.33
TSPAN4-207ENST00000397411 ACAD11Q709F0 780 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms