RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 LRCH3Q96II8 777 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 WDR6Q9NNW5 1121 aaKnown RBP11.79□□□□□ -0.52
SMU1-201ENST00000397149 SPATA31A1Q5TZJ5 1347 aa11.79□□□□□ -0.52
SMU1-201ENST00000397149 RPS10-NUDT3A0A1W2PQS6 291 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 AQP7O14520 342 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 ZNF43P17038 809 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 RPS10P46783 165 aaKnown RBP11.78□□□□□ -0.52
SMU1-201ENST00000397149 CHADLQ6NUI6 762 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 NPAS3Q8IXF0 933 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 SYT14Q8NB59 555 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 ZNRF4Q8WWF5 429 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 ALG3Q92685 438 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 PEX11GQ96HA9 241 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 PRODH2Q9UF12 536 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 WIF1Q9Y5W5 379 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 KAT6AQ92794 2004 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 OR2T1O43869 369 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 VEGFDO43915 354 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 ALDOBP05062 364 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 ITGB2P05107 769 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 UCHL1P09936 223 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 SLURP2P0DP57 97 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 BPIP17213 487 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 DUSP3P51452 185 aaPredicted RBP11.78□□□□□ -0.52
SMU1-201ENST00000397149 SLAMF1Q13291 335 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 ZSWIM9Q86XI8 627 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 OR4K13Q8NH42 304 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 RBM14Q96PK6 669 aaKnown RBP11.78□□□□□ -0.52
SMU1-201ENST00000397149 ZNF160Q9HCG1 818 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 GFOD1Q9NXC2 390 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 EDDM13A0A1B0GTR0 161 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 SNCGO76070 127 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 FAM163BP0C2L3 166 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 MRPS34P82930 218 aaKnown RBP11.78□□□□□ -0.52
SMU1-201ENST00000397149 ELOCQ15369 112 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 PCGF3Q3KNV8 242 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 DEFB134Q4QY38 66 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 TANGO2Q6ICL3 276 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 LCLAT1Q6UWP7 414 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 H1FXQ92522 213 aaKnown RBP11.78□□□□□ -0.52
SMU1-201ENST00000397149 CCDC74AQ96AQ1 378 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 ZFYVE21Q9BQ24 234 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 ARMC1Q9NVT9 282 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 FZD10Q9ULW2 581 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 OSGIN2Q9Y236 505 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 PCDHGA1Q9Y5H4 931 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 SERTM2A0A1B0GWG4 89 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 ANKRD30BLA7E2S9 258 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 SOCS6O14544 535 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 CHRNB2P17787 502 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 SLC14A1Q13336 389 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 CLINT1Q14677 625 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 ABHD17BQ5VST6 288 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 BRICD5Q6PL45 260 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 OVCH1Q7RTY7 1134 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 IL17RDQ8NFM7 739 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 TSACCQ96A04 125 aaPredicted RBP11.78□□□□□ -0.52
SMU1-201ENST00000397149 HRH4Q9H3N8 390 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 OR2J3O76001 311 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 BMP1P13497 986 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 VEGFCP49767 419 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 RPL23AP62750 156 aaKnown RBP11.78□□□□□ -0.52
SMU1-201ENST00000397149 ZNF829Q3KNS6 432 aaPredicted RBP11.78□□□□□ -0.52
SMU1-201ENST00000397149 SHISA6Q6ZSJ9 500 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 LINC00471Q8N535 108 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 PKP2Q99959 881 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 KCNK12Q9HB15 430 aa11.78□□□□□ -0.52
SMU1-201ENST00000397149 SH2D7A6NKC9 451 aaPredicted RBP11.77□□□□□ -0.52
SMU1-201ENST00000397149 KIAA0355O15063 1070 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 XCR1P46094 333 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 CES4AQ5XG92 561 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 SSX7Q7RTT5 188 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 DBF4BQ8NFT6 615 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 CREB3L4Q8TEY5 395 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 ACOT11Q8WXI4 607 aaPredicted RBP11.77□□□□□ -0.52
SMU1-201ENST00000397149 CCDC32Q9BV29 185 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 APMAPQ9HDC9 416 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 FBXW11Q9UKB1 542 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 NME7Q9Y5B8 376 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 LRCH4O75427 683 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 HLA-DQB2P05538 268 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 ASGR2P07307 311 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 CBSLP0DN79 551 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 G0S2P27469 103 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 CBSP35520 551 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 GABRA4P48169 554 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 GSK3AP49840 483 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 RPS26P62854 115 aaKnown RBP11.77□□□□□ -0.52
SMU1-201ENST00000397149 APOFQ13790 326 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 FAM214AQ32MH5 1076 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 SPANXN4Q5MJ08 99 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 ZCCHC11Q5TAX3 1644 aaKnown RBP11.77□□□□□ -0.52
SMU1-201ENST00000397149 C3P1Q6ZMU1 363 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 TSPAN33Q86UF1 283 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 TERB2Q8NHR7 220 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 ARL11Q969Q4 196 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 FOXN4Q96NZ1 517 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 ABCG5Q9H222 651 aa11.77□□□□□ -0.52
SMU1-201ENST00000397149 TUSC2O75896 110 aa11.77□□□□□ -0.53
SMU1-201ENST00000397149 RPA2P15927 270 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms