RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 SNX10Q9Y5X0 201 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 FKBP7Q9Y680 259 aa8.02□□□□□ -1.13
NDE1-202ENST00000396355 RFXANKO14593 260 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 VPS26AO75436 327 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 CXCL14O95715 111 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 MT-ND4P03905 459 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 ADH1AP07327 375 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 PBLDP30039 288 aaPredicted RBP8.01□□□□□ -1.13
NDE1-202ENST00000396355 TAF6P49848 677 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 AP1S2P56377 157 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 CARD18P57730 90 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 ZNF674Q2M3X9 581 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 C1orf189Q5VU69 101 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 ESRP1Q6NXG1 681 aaKnown RBP8.01□□□□□ -1.13
NDE1-202ENST00000396355 ZNF705AQ6ZN79 300 aaPredicted RBP8.01□□□□□ -1.13
NDE1-202ENST00000396355 MSANTD1Q6ZTZ1 278 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 MAMDC2Q7Z304 686 aaPredicted RBP8.01□□□□□ -1.13
NDE1-202ENST00000396355 TCTE3Q8IZS6 198 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 ZNF561Q8N587 486 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 PANX1Q96RD7 426 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 TCF25Q9BQ70 676 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 CLSTN3Q9BQT9 956 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 EVA1AQ9H8M9 152 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 MTCH2Q9Y6C9 303 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 TTC3P53804 2025 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 KNL1Q8NG31 2342 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 TCF20Q9UGU0 1960 aaKnown RBP8.01□□□□□ -1.13
NDE1-202ENST00000396355 LINC00862A6NCI5 91 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 MROH6A6NGR9 719 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 CD8B2A6NJW9 211 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 CPSF4LA6NMK7 179 aaKnown RBP8.01□□□□□ -1.13
NDE1-202ENST00000396355 HACD1B0YJ81 288 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 SLC16A6O15403 523 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 TLR5O60602 858 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 TPOP07202 933 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 CD8BP10966 210 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 PTPN3P26045 913 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 GCGRP47871 477 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 OR1E2P47887 323 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 LILRA4P59901 499 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 SEMA3BQ13214 749 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 MAD2L1BPQ15013 274 aaPredicted RBP8.01□□□□□ -1.13
NDE1-202ENST00000396355 TAF1AQ15573 450 aaPredicted RBP8.01□□□□□ -1.13
NDE1-202ENST00000396355 TIGD5Q53EQ6 642 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 ATAT1Q5SQI0 421 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 ZNF691Q5VV52 312 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 CNKSR3Q6P9H4 555 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 DOK6Q6PKX4 331 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 FAM122BQ7Z309 247 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 TSPYL5Q86VY4 417 aaPredicted RBP8.01□□□□□ -1.13
NDE1-202ENST00000396355 ADGRG2Q8IZP9 1017 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 THAP3Q8WTV1 239 aaPredicted RBP8.01□□□□□ -1.13
NDE1-202ENST00000396355 ISL2Q96A47 359 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 NSUN5Q96P11 429 aaKnown RBP8.01□□□□□ -1.13
NDE1-202ENST00000396355 IRAK3Q9Y616 596 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 MFSD2BA6NFX1 497 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 YJEFN3A6XGL0 299 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 SUV39H1O43463 412 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 EBLN1P0CF75 366 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 TRAPPC2P0DI81 140 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 TRAPPC2BP0DI82 140 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 CPT2P23786 658 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 CSF2RBP32927 897 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 RYKP34925 604 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 ADH7P40394 386 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 RFX2P48378 723 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 DEFB103AP81534 67 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 PAFAH1B3Q15102 231 aaKnown RBP8.01□□□□□ -1.13
NDE1-202ENST00000396355 RNF219Q5W0B1 726 aaPredicted RBP8.01□□□□□ -1.13
NDE1-202ENST00000396355 KCTD11Q693B1 232 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 FIGNL1Q6PIW4 674 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 SHFQ7M4L6 423 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 CLEC14AQ86T13 490 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 FAM124AQ86V42 546 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 ZNF383Q8NA42 475 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 OR4M2Q8NGB6 313 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 EEF1AKMT1Q8WVE0 214 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 NELL1Q92832 810 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 GCDHQ92947 438 aaPredicted RBP8.01□□□□□ -1.13
NDE1-202ENST00000396355 C3orf30Q96M34 536 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 MARK1Q9P0L2 795 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 FZD4Q9ULV1 537 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 WDR45Q9Y484 360 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 COL4A4P53420 1690 aaPredicted RBP8.01□□□□□ -1.13
NDE1-202ENST00000396355 FAM186AA6NE01 2351 aa8.01□□□□□ -1.13
NDE1-202ENST00000396355 PTGESO14684 152 aa8□□□□□ -1.13
NDE1-202ENST00000396355 ANKRD28O15084 1053 aa8□□□□□ -1.13
NDE1-202ENST00000396355 MED6O75586 246 aa8□□□□□ -1.13
NDE1-202ENST00000396355 OR4F21O95013 312 aa8□□□□□ -1.13
NDE1-202ENST00000396355 SBK3P0C264 359 aa8□□□□□ -1.13
NDE1-202ENST00000396355 SELLP14151 372 aa8□□□□□ -1.13
NDE1-202ENST00000396355 NFYAP23511 347 aaPredicted RBP8□□□□□ -1.13
NDE1-202ENST00000396355 ADRA1BP35368 520 aa8□□□□□ -1.13
NDE1-202ENST00000396355 ANXA11P50995 505 aaKnown RBP8□□□□□ -1.13
NDE1-202ENST00000396355 SCGB2B2Q4G0G5 96 aa8□□□□□ -1.13
NDE1-202ENST00000396355 SEZ6L2Q6UXD5 910 aa8□□□□□ -1.13
NDE1-202ENST00000396355 TMEM135Q86UB9 458 aa8□□□□□ -1.13
NDE1-202ENST00000396355 PSTKQ8IV42 348 aaKnown RBP8□□□□□ -1.13
NDE1-202ENST00000396355 GTPBP8Q8N3Z3 284 aaPredicted RBP8□□□□□ -1.13
NDE1-202ENST00000396355 C9orf62Q8N4C0 152 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms