RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 FMO6PO60774 539 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 CSF2P04141 144 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ARSAP15289 507 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 SLC9A3P48764 834 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 POU6F2P78424 691 aaPredicted RBP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 EIF3IQ13347 325 aaKnown RBP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF829Q3KNS6 432 aaPredicted RBP3.21□□□□□ -1.9
VPS13C-203ENST00000395896 TMEM207Q6UWW9 146 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 LUZP2Q86TE4 346 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 SLC34A3Q8N130 599 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ZFP90Q8TF47 636 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 PHYHIPQ92561 330 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ZNF570Q96NI8 536 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 ZPBPQ9BS86 351 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 UBQLN4Q9NRR5 601 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 RIMS3Q9UJD0 308 aa3.21□□□□□ -1.9
VPS13C-203ENST00000395896 LRIT2A6NDA9 550 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 SLC16A6O15403 523 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 NSA2O95478 260 aaKnown RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 HMGN2P05204 90 aaKnown RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 SLC35E2P0CK97 266 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 SLC6A6P31641 620 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 DHPSP49366 369 aaPredicted RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 RAB8AP61006 207 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 RPS15P62841 145 aaKnown RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 TLR1Q15399 786 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 GPR139Q6DWJ6 353 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 ADGRG5Q8IZF4 528 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 ZSCAN1Q8NBB4 408 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 PLA2G15Q8NCC3 412 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 PAPD5Q8NDF8 572 aaKnown RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 WDR20Q8TBZ3 569 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 NETO1Q8TDF5 533 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 NMD3Q96D46 503 aaKnown RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 DENND4AQ7Z401 1863 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 SH3PXD2BA1X283 911 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 OR6C74A6NCV1 312 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 OR7A17O14581 309 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 ALPLP05186 524 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 MLLT1Q03111 559 aaPredicted RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 HSF2Q03933 536 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 CGB2Q6NT52 195 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 MCFD2Q8NI22 146 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 SNX33Q8WV41 574 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 SLC46A1Q96NT5 459 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 MROQ9BYG7 248 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 C20orf27Q9GZN8 174 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 SP140LQ9H930 580 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 PCDHGA4Q9Y5G9 962 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 ISPDA4D126 451 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 VSTM2BA6NLU5 285 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 EFCAB7A8K855 629 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 B4DGG1 531 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 C6orf47O95873 294 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 POLR2CP19387 275 aaPredicted RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 SEMG2Q02383 582 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 SF3B4Q15427 424 aaKnown RBP eCLIP3.2□□□□□ -1.92e-10■■■■□ 19.4
VPS13C-203ENST00000395896 CYP27C1Q4G0S4 372 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 AGBL4Q5VU57 503 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 SLC48A1Q6P1K1 146 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 TRIM74Q86UV6 250 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 ACBD7Q8N6N7 88 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 SCAIQ8N9R8 606 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 POMGNT2Q8NAT1 580 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 AQP11Q8NBQ7 271 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 OR52J3Q8NH60 311 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 OR14A16Q8NHC5 309 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 ZDHHC1Q8WTX9 485 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 COMMD4Q9H0A8 199 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 UCK1Q9HA47 277 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 SAP18O00422 153 aaKnown RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 OR5F1O95221 314 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 AHSA1O95433 338 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 EFEMP2O95967 443 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 MRPS15P82914 257 aaKnown RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 REEP5Q00765 189 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 MZT2BQ6NZ67 158 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 PLET1Q6UQ28 207 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 HSDL2Q6YN16 418 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 CBLL1Q75N03 491 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 PPP1R3BQ86XI6 285 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 GOT1L1Q8NHS2 421 aaPredicted RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 DACT3Q96B18 629 aaPredicted RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 APIPQ96GX9 242 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 KCTD7Q96MP8 289 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 MND1Q9BWT6 205 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 PINK1Q9BXM7 581 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 CD300AQ9UGN4 299 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 CORINQ9Y5Q5 1042 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 CFAP20Q9Y6A4 193 aaKnown RBP3.2□□□□□ -1.9
VPS13C-203ENST00000395896 NAV2Q8IVL1 2488 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 CTNSO60931 367 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 PGCP20142 388 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 CXCR1P25024 350 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 PDHA2P29803 388 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 PARM1Q6UWI2 310 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 CYHR1Q6ZMK1 362 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 CCDC80Q76M96 950 aa3.2□□□□□ -1.9
VPS13C-203ENST00000395896 MFSD9Q8NBP5 474 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms