RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 SLC6A14Q9UN76 642 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 ERGIC3Q9Y282 383 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 SLC17A4Q9Y2C5 497 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 N6AMT1Q9Y5N5 214 aa14.97□□□□□ -0.01
SMARCD1-202ENST00000394963 BDP1A6H8Y1 2624 aa14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 FAM183AA6NL82 134 aa14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 MAGEB3O15480 346 aa14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 P2RX6O15547 441 aa14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 AIREO43918 545 aa14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 ADARB1P78563 741 aaKnown RBP14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 MRPS21P82921 87 aaKnown RBP14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 SLC30A6Q6NXT4 461 aa14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 LACC1Q8IV20 430 aa14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 OR51L1Q8NGJ5 315 aa14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 C1GALT1C1Q96EU7 318 aa14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 MAGIXQ9H6Y5 334 aa14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 FSCN3Q9NQT6 498 aa14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 MMP17Q9ULZ9 603 aa14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 HMGN4O00479 90 aa14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 AP1G1O43747 822 aa14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 ARAFP10398 606 aa14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 CD6P30203 668 aa14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 S100A5P33763 92 aa14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 FBXW4P57775 412 aa14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 RPS15AP62244 130 aaKnown RBP14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 TDGQ13569 410 aa14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 MYDGFQ969H8 173 aa14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 DEPDC7Q96QD5 511 aa14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 OR7D2Q96RA2 312 aa14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 GTPBP2Q9BX10 602 aaKnown RBP14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 UBE2ZQ9H832 354 aaPredicted RBP14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 CLEC4AQ9UMR7 237 aa14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 WDFY4Q6ZS81 3184 aa14.96□□□□□ -0.01
SMARCD1-202ENST00000394963 H3BMQ9 156 aa14.96□□□□□ -0.02
SMARCD1-202ENST00000394963 EMC8O43402 210 aa14.96□□□□□ -0.02
SMARCD1-202ENST00000394963 CTSBP07858 339 aa14.96□□□□□ -0.02
SMARCD1-202ENST00000394963 BMP7P18075 431 aa14.96□□□□□ -0.02
SMARCD1-202ENST00000394963 MYL12AP19105 171 aa14.96□□□□□ -0.02
SMARCD1-202ENST00000394963 PAICSP22234 425 aaKnown RBP14.96□□□□□ -0.02
SMARCD1-202ENST00000394963 ABATP80404 500 aa14.96□□□□□ -0.02
SMARCD1-202ENST00000394963 DUSP2Q05923 314 aa14.96□□□□□ -0.02
SMARCD1-202ENST00000394963 TOP3AQ13472 1001 aaPredicted RBP14.96□□□□□ -0.02
SMARCD1-202ENST00000394963 CDK20Q8IZL9 346 aa14.96□□□□□ -0.02
SMARCD1-202ENST00000394963 PIGKQ92643 395 aa14.96□□□□□ -0.02
SMARCD1-202ENST00000394963 COG8Q96MW5 612 aa14.96□□□□□ -0.02
SMARCD1-202ENST00000394963 USP36Q9P275 1121 aaKnown RBP14.96□□□□□ -0.02
SMARCD1-202ENST00000394963 NFKBIL1Q9UBC1 381 aaPredicted RBP14.96□□□□□ -0.02
SMARCD1-202ENST00000394963 RABIFP47224 123 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 GFERP55789 205 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 ITGA1P56199 1179 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 BNC1Q01954 994 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 MICAQ29983 383 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 FAM214AQ32MH5 1076 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 IQCCQ4KMZ1 466 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 HLA-DQA1Q5Y7H0 255 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 LHFPL3Q86UP9 236 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 CALHM3Q86XJ0 350 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 HDAC2Q92769 488 aaKnown RBP14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 TSSK6Q9BXA6 273 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 EGLN3Q9H6Z9 239 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 KLF15Q9UIH9 416 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 GMEB2Q9UKD1 530 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 POFUT2Q9Y2G5 429 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 TRBV5-3A0A0A0MS03 114 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 ALOX5P09917 674 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 RBBP4Q09028 425 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 ABHD11Q8NFV4 315 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 DACT3Q96B18 629 aaPredicted RBP14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 WFDC6Q9BQY6 131 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 RMI1Q9H9A7 625 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 C8orf4Q9NR00 106 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 MTCH2Q9Y6C9 303 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 GTPBP1O00178 669 aaKnown RBP14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 CLDN4O14493 209 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 KLHL18O94889 574 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 TSPAN19P0C672 248 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 IL9P15248 144 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 PORP16435 677 aaPredicted RBP14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 MVKQ03426 396 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 MYBPC3Q14896 1274 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 TSTQ16762 297 aaKnown RBP14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 FBXO43Q4G163 708 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 TMEM35AQ53FP2 167 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 ARMCX4Q5H9R4 360 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 RBM48Q5RL73 367 aaKnown RBP14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 UBE3DQ7Z6J8 389 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 NRMQ8IXM6 262 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 SMRP1Q8NCR6 262 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 TBC1D17Q9HA65 648 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 RNF6Q9Y252 685 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 MRPS17Q9Y2R5 130 aaKnown RBP14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 PCDHGA2Q9Y5H1 932 aa14.95□□□□□ -0.02
SMARCD1-202ENST00000394963 SNRNP200O75643 2136 aaKnown RBP14.94□□□□□ -0.02
SMARCD1-202ENST00000394963 C4orf51C9J302 202 aa14.94□□□□□ -0.02
SMARCD1-202ENST00000394963 DRD2P14416 443 aa14.94□□□□□ -0.02
SMARCD1-202ENST00000394963 CD38P28907 300 aa14.94□□□□□ -0.02
SMARCD1-202ENST00000394963 PDX1P52945 283 aa14.94□□□□□ -0.02
SMARCD1-202ENST00000394963 TRIM16LQ309B1 348 aa14.94□□□□□ -0.02
SMARCD1-202ENST00000394963 OR8H2Q8N162 312 aa14.94□□□□□ -0.02
SMARCD1-202ENST00000394963 ADAMTS16Q8TE57 1224 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms