RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 CLDN8P56748 225 aa3.31□□□□□ -1.88
XRN1-202ENST00000392981 TUBA4AP68366 448 aa3.31□□□□□ -1.88
XRN1-202ENST00000392981 ILKQ13418 452 aa3.31□□□□□ -1.88
XRN1-202ENST00000392981 SNTA1Q13424 505 aa3.31□□□□□ -1.88
XRN1-202ENST00000392981 GPR107Q5VW38 600 aa3.31□□□□□ -1.88
XRN1-202ENST00000392981 OR4A47Q6IF82 309 aa3.31□□□□□ -1.88
XRN1-202ENST00000392981 Q6ZS46 218 aa3.31□□□□□ -1.88
XRN1-202ENST00000392981 TMEM139Q8IV31 216 aa3.31□□□□□ -1.88
XRN1-202ENST00000392981 C12orf56Q8IXR9 622 aa3.31□□□□□ -1.88
XRN1-202ENST00000392981 NT5C3BQ969T7 300 aa3.31□□□□□ -1.88
XRN1-202ENST00000392981 DGCR14Q96DF8 476 aaKnown RBP3.31□□□□□ -1.88
XRN1-202ENST00000392981 C7orf34Q96L11 122 aa3.31□□□□□ -1.88
XRN1-202ENST00000392981 ANKHQ9HCJ1 492 aa3.31□□□□□ -1.88
XRN1-202ENST00000392981 CD320Q9NPF0 282 aa3.31□□□□□ -1.88
XRN1-202ENST00000392981 ADAP2Q9NPF8 381 aa3.31□□□□□ -1.88
XRN1-202ENST00000392981 AGO2Q9UKV8 859 aaKnown RBP3.31□□□□□ -1.88
XRN1-202ENST00000392981 MEMO1Q9Y316 297 aa3.31□□□□□ -1.88
XRN1-202ENST00000392981 CCDC171Q6TFL3 1326 aa3.31□□□□□ -1.88
XRN1-202ENST00000392981 DIP2BQ9P265 1576 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 ASPMQ8IZT6 3477 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 TMEM191CA6NGB0 347 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 WASHC1A8K0Z3 465 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 C17orf100A8MU93 164 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 TXNDC9O14530 226 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 CHEK1O14757 476 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 LRP3O75074 770 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 NDUFB10O96000 172 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 TNNC2P02585 160 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 CXCL10P02778 98 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 TMEM191BP0C7N4 346 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 POLR2CP19387 275 aaPredicted RBP3.3□□□□□ -1.88
XRN1-202ENST00000392981 HPCAL1P37235 193 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 UBE2G2P60604 165 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 CFHR3Q02985 330 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 CEACAM7Q14002 265 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 EXOSC7Q15024 291 aaKnown RBP3.3□□□□□ -1.88
XRN1-202ENST00000392981 MICBQ29980 383 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 ULK3Q6PHR2 472 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 TPRG1Q6ZUI0 275 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 FJX1Q86VR8 437 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 CRLF3Q8IUI8 442 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 LAS2Q8IYD9 372 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 TTC29Q8NA56 475 aaPredicted RBP3.3□□□□□ -1.88
XRN1-202ENST00000392981 OR11H4Q8NGC9 324 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 OSR1Q8TAX0 266 aaPredicted RBP3.3□□□□□ -1.88
XRN1-202ENST00000392981 CHPT1Q8WUD6 406 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 OR1E3Q8WZA6 343 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 ST8SIA1Q92185 356 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 TM9SF4Q92544 642 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 AGPAT1Q99943 283 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 HAUS8Q9BT25 410 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 TM6SF1Q9BZW5 370 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 OLFML3Q9NRN5 406 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 SERINC1Q9NRX5 453 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 UXTQ9UBK9 157 aaPredicted RBP3.3□□□□□ -1.88
XRN1-202ENST00000392981 NUP50Q9UKX7 468 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 TIMM22Q9Y584 194 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 TIAM1Q13009 1591 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 TCP10L2B9ZVM9 353 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 GSC2O15499 205 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 CYTH3O43739 400 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 NDUFS6O75380 124 aaKnown RBP3.3□□□□□ -1.88
XRN1-202ENST00000392981 CDK14O94921 469 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 TGFB1P01137 390 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 CEACAM1P13688 526 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 FBLN1P23142 703 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 GDNFP39905 211 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 SMCPP49901 116 aaPredicted RBP3.3□□□□□ -1.88
XRN1-202ENST00000392981 INHBCP55103 352 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 NTHL1P78549 312 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 OPCMLQ14982 345 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 LRRC74BQ6ZQY2 392 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 MON1BQ7L1V2 547 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 SPRED2Q7Z698 418 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 DTX2Q86UW9 622 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 PARP8Q8N3A8 854 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 TMEM199Q8N511 208 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 ARFGAP1Q8N6T3 406 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 ACVR1CQ8NER5 493 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 TMEM18Q96B42 140 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 LENG9Q96B70 501 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 NEU1Q99519 415 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 ELOVL6Q9H5J4 265 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 STMN3Q9NZ72 180 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 ZNF639Q9UID6 485 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 LAMP3Q9UQV4 416 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 WNT6Q9Y6F9 365 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 MBLAC1A4D2B0 266 aaPredicted RBP3.3□□□□□ -1.88
XRN1-202ENST00000392981 C15orf62A8K5M9 175 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 CLDN5O00501 218 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 SAP30O75446 220 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 GOT2P00505 430 aaKnown RBP3.3□□□□□ -1.88
XRN1-202ENST00000392981 G0S2P27469 103 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 HTR2AP28223 471 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 ERVFRD-1P60508 538 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 DSTNP60981 165 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 BTG1P62324 171 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 ERVK-25P63136 954 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 ITGA9Q13797 1035 aa3.3□□□□□ -1.88
XRN1-202ENST00000392981 C9orf135Q5VTT2 229 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms