RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 CD207Q9UJ71 328 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 GNPTGQ9UJJ9 305 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 FBXW11Q9UKB1 542 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 DDX19BQ9UMR2 479 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 RCE1Q9Y256 329 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 CHKBQ9Y259 395 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 ANGPT4Q9Y264 503 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF443Q9Y2A4 671 aaPredicted RBP-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 LRCH1Q9Y2L9 728 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 AAR2Q9Y312 384 aaKnown RBP-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 DERAQ9Y315 318 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 IFT52Q9Y366 437 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 GRIP1Q9Y3R0 1128 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 TRIM17Q9Y577 477 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 KIAA1217Q5T5P2 1943 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 C2orf16Q68DN1 1984 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 NEDD4P46934 1319 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 NPHP3Q7Z494 1330 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 PTPRTO14522 1441 aa-0.49□□□□□ -2.49
TRAJ28-201ENST00000390509 WDR87Q6ZQQ6 2873 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CR1P17927 2039 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 NCOR1O75376 2440 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 A0A087X0B3 334 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 A0A0A6YYD4 124 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 IGKV1-12A0A0C4DH73 117 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 FEZF1A0PJY2 475 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 TMEM120BA0PK00 339 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 AGAP14A8MT82 685 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 G3V3Y1 287 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CCDC188H7C350 402 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 RTCAO00442 366 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 GABRDO14764 452 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ATP2A1O14983 1001 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ARPC2O15144 300 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 POLR1CO15160 346 aaPredicted RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 RAD51BO15315 384 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF264O43296 627 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF207O43670 478 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 PLPP2O43688 288 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 TSPAN1O60635 241 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 PQBP1O60828 265 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 DUSP11O75319 330 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 SAP30O75446 220 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 JRKO75564 520 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 AKR7A3O95154 331 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CELF2O95319 508 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CPSF4O95639 269 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CXCL14O95715 111 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 WDPCPO95876 746 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 NPPAP01160 153 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 IGKV1D-12P01611 117 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 IGHV3-48P01763 117 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 IGHDP01880 384 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 PFN1P07737 140 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 GALTP07902 379 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 MMP10P09238 476 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 RAB40ALP0C0E4 278 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 HSPA8P11142 646 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 IFITM1P13164 125 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 PVRP15151 417 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 FOSL2P15408 326 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 NPPBP16860 134 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF7P17097 686 aaPredicted RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 RPL17P18621 184 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ATF6P18850 670 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CYP11B2P19099 503 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ABCB4P21439 1286 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 FGFR2P21802 821 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CCND1P24385 295 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 KDELR1P24390 212 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 IGFBP5P24593 272 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CNTFRP26992 372 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CALML3P27482 149 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 SERPINA4P29622 427 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CNGA1P29973 690 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 NTSP30990 170 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 HOXA6P31267 233 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 SPRR2BP35325 72 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ADRA1AP35348 466 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 PRCPP42785 496 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CXCL5P42830 114 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 BTDP43251 543 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 SYKP43405 635 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CDX1P47902 265 aaPredicted RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 LGALS7P47929 136 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ALDH3A2P51648 485 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 HNRNPFP52597 415 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CLDN15P56746 228 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 PRPS1P60891 318 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 SNRPEP62304 92 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 BTG1P62324 171 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 RPL32P62910 135 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ASIC1P78348 528 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 MRPS34P82930 218 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 IL5RAQ01344 420 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 RBBP4Q09028 425 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 SYCNQ0VAF6 134 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 LMOD3Q0VAK6 560 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 TRAP1Q12931 704 aaKnown RBP-0.5□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms