RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 IL6P05231 212 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 PGRP06401 933 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 CASRP41180 1078 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 ST13P50502 369 aaKnown RBP17.32■□□□□ 0.36
SSU72-203ENST00000378725 NR0B1P51843 470 aaKnown RBP17.32■□□□□ 0.36
SSU72-203ENST00000378725 ZNF169Q14929 603 aaPredicted RBP17.32■□□□□ 0.36
SSU72-203ENST00000378725 OR1C1Q15619 314 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 SPINK14Q6IE38 97 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 PAOXQ6QHF9 649 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 OPN5Q6U736 354 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 HORMAD2Q8N7B1 307 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 VPS37AQ8NEZ2 397 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 SLC22A8Q8TCC7 542 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 ASB15Q8WXK1 588 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 HOXB13Q92826 284 aaPredicted RBP17.32■□□□□ 0.36
SSU72-203ENST00000378725 MAGED4Q96JG8 741 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 LCORQ96JN0 433 aaPredicted RBP17.32■□□□□ 0.36
SSU72-203ENST00000378725 RILPQ96NA2 401 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 BTBD9Q96Q07 612 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 TMEM120AQ9BXJ8 343 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 ITPAQ9BY32 194 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.32■□□□□ 0.365e-9■■□□□ 12.3
SSU72-203ENST00000378725 NXF5Q9H1B4 397 aaKnown RBP17.32■□□□□ 0.36
SSU72-203ENST00000378725 FOLH1BQ9HBA9 442 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 C3orf14Q9HBI5 128 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 NEUROD4Q9HD90 331 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 FAM120CQ9NX05 1096 aaKnown RBP17.32■□□□□ 0.36
SSU72-203ENST00000378725 LRFN1Q9P244 771 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 KLHL14Q9P2G3 628 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 PCDHGB6Q9Y5F9 930 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 COPG1Q9Y678 874 aaKnown RBP17.32■□□□□ 0.36
SSU72-203ENST00000378725 CPAMD8Q8IZJ3 1885 aa17.32■□□□□ 0.36
SSU72-203ENST00000378725 IGSF10Q6WRI0 2623 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 TO15178 435 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 ACOX3O15254 700 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 C1QL1O75973 258 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 PRB1P04280 392 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 CT45A8P0DMV1 189 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 CT45A9P0DMV2 189 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 LSP1P33241 339 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 SOX3P41225 446 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 POLR2JP52435 117 aaKnown RBP17.31■□□□□ 0.36
SSU72-203ENST00000378725 DGKQP52824 942 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 ARFIP2P53365 341 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 STX1BP61266 288 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 HBA1P69905 142 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 OC90Q02509 493 aaPredicted RBP17.31■□□□□ 0.36
SSU72-203ENST00000378725 ZNF791Q3KP31 576 aaPredicted RBP17.31■□□□□ 0.36
SSU72-203ENST00000378725 CT45A2Q5DJT8 189 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 RPUSD3Q6P087 351 aaKnown RBP17.31■□□□□ 0.36
SSU72-203ENST00000378725 TMEM64Q6YI46 380 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 CLECL1Q8IZS7 167 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 TAGAPQ8N103 731 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 ZNF843Q8N446 348 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 Q8NA96 180 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 NUP43Q8NFH3 380 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 FAM120BQ96EK7 910 aaKnown RBP17.31■□□□□ 0.36
SSU72-203ENST00000378725 HSPBAP1Q96EW2 488 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 GIMAP5Q96F15 307 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 ZNF385DQ9H6B1 395 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 CXorf36Q9H7Y0 433 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 BTNL2Q9UIR0 455 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 TRIM33Q9UPN9 1127 aa17.31■□□□□ 0.36
SSU72-203ENST00000378725 FAM234BA2RU67 622 aa17.3■□□□□ 0.36
SSU72-203ENST00000378725 FRG2CA6NGY1 282 aa17.3■□□□□ 0.36
SSU72-203ENST00000378725 A8MVJ9 347 aa17.3■□□□□ 0.36
SSU72-203ENST00000378725 C9JVG2 144 aa17.3■□□□□ 0.36
SSU72-203ENST00000378725 NME6O75414 186 aaPredicted RBP17.3■□□□□ 0.36
SSU72-203ENST00000378725 ERN1O75460 977 aaKnown RBP17.3■□□□□ 0.36
SSU72-203ENST00000378725 SORBS2O94875 1100 aaKnown RBP17.3■□□□□ 0.36
SSU72-203ENST00000378725 FBXO45P0C2W1 286 aa17.3■□□□□ 0.36
SSU72-203ENST00000378725 MAP3K8P41279 467 aa17.3■□□□□ 0.36
SSU72-203ENST00000378725 SEC24CP53992 1094 aa17.3■□□□□ 0.36
SSU72-203ENST00000378725 LRRC74AQ0VAA2 488 aa17.3■□□□□ 0.36
SSU72-203ENST00000378725 SQLEQ14534 574 aa17.3■□□□□ 0.36
SSU72-203ENST00000378725 IL20RBQ6UXL0 311 aa17.3■□□□□ 0.36
SSU72-203ENST00000378725 FUNDC1Q8IVP5 155 aa17.3■□□□□ 0.36
SSU72-203ENST00000378725 DND1Q8IYX4 353 aaKnown RBP17.3■□□□□ 0.36
SSU72-203ENST00000378725 OR9I1Q8NGQ6 314 aa17.3■□□□□ 0.36
SSU72-203ENST00000378725 GOT1L1Q8NHS2 421 aaPredicted RBP17.3■□□□□ 0.36
SSU72-203ENST00000378725 SCMH1Q96GD3 660 aa17.3■□□□□ 0.36
SSU72-203ENST00000378725 SGCZQ96LD1 299 aa17.3■□□□□ 0.36
SSU72-203ENST00000378725 CCDC115Q96NT0 180 aa17.3■□□□□ 0.36
SSU72-203ENST00000378725 OR52E6Q96RD3 313 aa17.3■□□□□ 0.36
SSU72-203ENST00000378725 LMF2Q9BU23 707 aaKnown RBP17.3■□□□□ 0.36
SSU72-203ENST00000378725 HPF1Q9NWY4 346 aa17.3■□□□□ 0.36
SSU72-203ENST00000378725 PCDHGB4Q9UN71 923 aa17.3■□□□□ 0.36
SSU72-203ENST00000378725 NPFFR2Q9Y5X5 522 aa17.3■□□□□ 0.36
SSU72-203ENST00000378725 CROCCQ5TZA2 2017 aa17.3■□□□□ 0.36
SSU72-203ENST00000378725 TTC36A6NLP5 189 aa17.29■□□□□ 0.36
SSU72-203ENST00000378725 B8ZZF3 427 aa17.29■□□□□ 0.36
SSU72-203ENST00000378725 CFLARO15519 480 aa17.29■□□□□ 0.36
SSU72-203ENST00000378725 SUV39H1O43463 412 aa17.29■□□□□ 0.36
SSU72-203ENST00000378725 SP1P08047 785 aa17.29■□□□□ 0.36
SSU72-203ENST00000378725 CD46P15529 392 aa17.29■□□□□ 0.36
SSU72-203ENST00000378725 NAGAP17050 411 aa17.29■□□□□ 0.36
SSU72-203ENST00000378725 NCF2P19878 526 aaPredicted RBP17.29■□□□□ 0.36
SSU72-203ENST00000378725 CCT3P49368 545 aaKnown RBP17.29■□□□□ 0.36
SSU72-203ENST00000378725 PSPHP78330 225 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms