RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 PDE7AQ13946 482 aa20.2■□□□□ 0.82
GFRA3-202ENST00000378362 ZNF791Q3KP31 576 aaPredicted RBP20.2■□□□□ 0.82
GFRA3-202ENST00000378362 SLC9B1Q4ZJI4 515 aa20.2■□□□□ 0.82
GFRA3-202ENST00000378362 OPN5Q6U736 354 aa20.2■□□□□ 0.82
GFRA3-202ENST00000378362 ATCAYQ86WG3 371 aa20.2■□□□□ 0.82
GFRA3-202ENST00000378362 SAMD14Q8IZD0 417 aaPredicted RBP20.2■□□□□ 0.82
GFRA3-202ENST00000378362 SLC22A8Q8TCC7 542 aa20.2■□□□□ 0.82
GFRA3-202ENST00000378362 SPACA9Q96E40 222 aaPredicted RBP20.2■□□□□ 0.82
GFRA3-202ENST00000378362 MARK4Q96L34 752 aa20.2■□□□□ 0.82
GFRA3-202ENST00000378362 C9JVG2 144 aa20.19■□□□□ 0.82
GFRA3-202ENST00000378362 UPK1AO00322 258 aa20.19■□□□□ 0.82
GFRA3-202ENST00000378362 ASMTP46597 345 aa20.19■□□□□ 0.82
GFRA3-202ENST00000378362 DNASE1L1P49184 302 aa20.19■□□□□ 0.82
GFRA3-202ENST00000378362 MANFP55145 182 aaKnown RBP20.19■□□□□ 0.82
GFRA3-202ENST00000378362 KCNK10P57789 538 aa20.19■□□□□ 0.82
GFRA3-202ENST00000378362 ZNF324BQ6AW86 544 aaPredicted RBP20.19■□□□□ 0.82
GFRA3-202ENST00000378362 LARP4Q71RC2 724 aaKnown RBP eCLIP20.19■□□□□ 0.82
GFRA3-202ENST00000378362 TRIM42Q8IWZ5 723 aa20.19■□□□□ 0.82
GFRA3-202ENST00000378362 OR4N2Q8NGD1 307 aa20.19■□□□□ 0.82
GFRA3-202ENST00000378362 PRR7Q8TB68 274 aa20.19■□□□□ 0.82
GFRA3-202ENST00000378362 TIMMDC1Q9NPL8 285 aa20.19■□□□□ 0.82
GFRA3-202ENST00000378362 EQTNQ9NQ60 294 aa20.19■□□□□ 0.82
GFRA3-202ENST00000378362 INTS9Q9NV88 658 aaKnown RBP20.19■□□□□ 0.82
GFRA3-202ENST00000378362 NPFFR2Q9Y5X5 522 aa20.19■□□□□ 0.82
GFRA3-202ENST00000378362 USP9YO00507 2555 aaPredicted RBP20.18■□□□□ 0.82
GFRA3-202ENST00000378362 NPIPA5E9PKD4 350 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 HDAC3O15379 428 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 ALDOCP09972 364 aaKnown RBP20.18■□□□□ 0.82
GFRA3-202ENST00000378362 PRKAG1P54619 331 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 PGS1Q32NB8 556 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 NXNQ6DKJ4 435 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 FAM47EQ6ZV65 393 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 SZRD1Q7Z422 152 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 GALNT11Q8NCW6 608 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 RAB3IL1Q8TBN0 382 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 LRRC8CQ8TDW0 803 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 NR4A3Q92570 626 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 ELP4Q96EB1 424 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 NOP53Q9NZM5 478 aaKnown RBP20.18■□□□□ 0.82
GFRA3-202ENST00000378362 NPIPA1Q9UND3 350 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 EXPH5Q8NEV8 1989 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 ANKUB1A6NFN9 424 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 SNUPNO95149 360 aaKnown RBP20.18■□□□□ 0.82
GFRA3-202ENST00000378362 PRPS2P11908 318 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 ABCD3P28288 659 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 GPC1P35052 558 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 HPCAL1P37235 193 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 NPSR1Q6W5P4 371 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 RTL4Q6ZR62 310 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 TAGAPQ8N103 731 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 FBXO30Q8TB52 745 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 SLX1AQ9BQ83 275 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 FOLH1BQ9HBA9 442 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 DDX18Q9NVP1 670 aaKnown RBP20.18■□□□□ 0.82
GFRA3-202ENST00000378362 KLF13Q9Y2Y9 288 aaPredicted RBP20.18■□□□□ 0.82
GFRA3-202ENST00000378362 PCDHGB6Q9Y5F9 930 aa20.18■□□□□ 0.82
GFRA3-202ENST00000378362 HS6ST1O60243 411 aa20.17■□□□□ 0.82
GFRA3-202ENST00000378362 PLOD3O60568 738 aa20.17■□□□□ 0.82
GFRA3-202ENST00000378362 FBXO45P0C2W1 286 aa20.17■□□□□ 0.82
GFRA3-202ENST00000378362 CT45A8P0DMV1 189 aa20.17■□□□□ 0.82
GFRA3-202ENST00000378362 CT45A9P0DMV2 189 aa20.17■□□□□ 0.82
GFRA3-202ENST00000378362 LBPP18428 481 aa20.17■□□□□ 0.82
GFRA3-202ENST00000378362 TDGF1P3P51864 188 aa20.17■□□□□ 0.82
GFRA3-202ENST00000378362 HSF1Q00613 529 aa20.17■□□□□ 0.82
GFRA3-202ENST00000378362 CT45A2Q5DJT8 189 aa20.17■□□□□ 0.82
GFRA3-202ENST00000378362 CPTPQ5TA50 214 aa20.17■□□□□ 0.82
GFRA3-202ENST00000378362 TMEM198Q66K66 360 aa20.17■□□□□ 0.82
GFRA3-202ENST00000378362 RIMKLAQ8IXN7 391 aa20.17■□□□□ 0.82
GFRA3-202ENST00000378362 THOC1Q96FV9 657 aaKnown RBP20.17■□□□□ 0.82
GFRA3-202ENST00000378362 OTUB1Q96FW1 271 aaPredicted RBP20.17■□□□□ 0.82
GFRA3-202ENST00000378362 LCORQ96JN0 433 aaPredicted RBP20.17■□□□□ 0.82
GFRA3-202ENST00000378362 TEX37Q96LM6 180 aa20.17■□□□□ 0.82
GFRA3-202ENST00000378362 OR52B2Q96RD2 323 aa20.17■□□□□ 0.82
GFRA3-202ENST00000378362 ATP6V1HQ9UI12 483 aa20.17■□□□□ 0.82
GFRA3-202ENST00000378362 NCKAP5O14513 1909 aa20.17■□□□□ 0.82
GFRA3-202ENST00000378362 FAM166BA8MTA8 275 aa20.16■□□□□ 0.82
GFRA3-202ENST00000378362 ZNF195O14628 629 aa20.16■□□□□ 0.82
GFRA3-202ENST00000378362 KLF11O14901 512 aa20.16■□□□□ 0.82
GFRA3-202ENST00000378362 UNC5CO95185 931 aa20.16■□□□□ 0.82
GFRA3-202ENST00000378362 ABCB1P08183 1280 aaPredicted RBP20.16■□□□□ 0.82
GFRA3-202ENST00000378362 ALDH6A1Q02252 535 aaKnown RBP20.16■□□□□ 0.82
GFRA3-202ENST00000378362 ZNF155Q12901 538 aaPredicted RBP20.16■□□□□ 0.82
GFRA3-202ENST00000378362 PIWIL2Q8TC59 973 aaKnown RBP20.16■□□□□ 0.82
GFRA3-202ENST00000378362 TP53INP1Q96A56 240 aa20.16■□□□□ 0.82
GFRA3-202ENST00000378362 VSTM2LQ96N03 204 aa20.16■□□□□ 0.82
GFRA3-202ENST00000378362 GPR55Q9Y2T6 319 aaPredicted RBP20.16■□□□□ 0.82
GFRA3-202ENST00000378362 CHCHD2Q9Y6H1 151 aaPredicted RBP20.16■□□□□ 0.82
GFRA3-202ENST00000378362 SETXQ7Z333 2677 aaKnown RBP20.16■□□□□ 0.82
GFRA3-202ENST00000378362 ASPDHA6ND91 283 aa20.16■□□□□ 0.82
GFRA3-202ENST00000378362 ERN1O75460 977 aaKnown RBP20.16■□□□□ 0.82
GFRA3-202ENST00000378362 PDE9AO76083 593 aa20.16■□□□□ 0.82
GFRA3-202ENST00000378362 SRSF1Q07955 248 aaKnown RBP eCLIP20.16■□□□□ 0.82
GFRA3-202ENST00000378362 R3HCC1LQ7Z5L2 792 aaKnown RBP20.16■□□□□ 0.82
GFRA3-202ENST00000378362 SLC44A2Q8IWA5 706 aaPredicted RBP20.16■□□□□ 0.82
GFRA3-202ENST00000378362 OR2M7Q8NG81 312 aa20.16■□□□□ 0.82
GFRA3-202ENST00000378362 TMBIM1Q969X1 311 aa20.16■□□□□ 0.82
GFRA3-202ENST00000378362 PROK2Q9HC23 129 aa20.16■□□□□ 0.82
GFRA3-202ENST00000378362 PRODH2Q9UF12 536 aa20.16■□□□□ 0.82
GFRA3-202ENST00000378362 C19orf53Q9UNZ5 99 aaPredicted RBP20.16■□□□□ 0.82
GFRA3-202ENST00000378362 SNX8Q9Y5X2 465 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms