RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 MKLN1Q9UL63 735 aa15.31■□□□□ 0.04
TRIM27-202ENST00000377199 GPR55Q9Y2T6 319 aaPredicted RBP15.31■□□□□ 0.04
TRIM27-202ENST00000377199 LTBP2Q14767 1821 aa15.31■□□□□ 0.04
TRIM27-202ENST00000377199 KIAA1549LQ6ZVL6 1849 aa15.31■□□□□ 0.04
TRIM27-202ENST00000377199 GRXCR1A8MXD5 290 aa15.31■□□□□ 0.04
TRIM27-202ENST00000377199 TAS2R38P59533 333 aa15.31■□□□□ 0.04
TRIM27-202ENST00000377199 CDC20Q12834 499 aa15.31■□□□□ 0.04
TRIM27-202ENST00000377199 IRF4Q15306 451 aa15.31■□□□□ 0.04
TRIM27-202ENST00000377199 SF3B4Q15427 424 aaKnown RBP eCLIP15.31■□□□□ 0.049e-9■■■■■ 30.5
TRIM27-202ENST00000377199 TMEM52BQ4KMG9 183 aa15.31■□□□□ 0.04
TRIM27-202ENST00000377199 PHC2Q8IXK0 858 aa15.31■□□□□ 0.04
TRIM27-202ENST00000377199 OR2A1Q8NGT9 310 aa15.31■□□□□ 0.04
TRIM27-202ENST00000377199 DMRTB1Q96MA1 342 aa15.31■□□□□ 0.04
TRIM27-202ENST00000377199 CRISPLD2Q9H0B8 497 aa15.31■□□□□ 0.04
TRIM27-202ENST00000377199 SYNPO2LQ9H987 977 aa15.31■□□□□ 0.04
TRIM27-202ENST00000377199 DDX28Q9NUL7 540 aaKnown RBP15.31■□□□□ 0.04
TRIM27-202ENST00000377199 SPHK1Q9NYA1 384 aa15.31■□□□□ 0.04
TRIM27-202ENST00000377199 CRNNQ9UBG3 495 aaPredicted RBP15.31■□□□□ 0.04
TRIM27-202ENST00000377199 PTPRSQ13332 1948 aa15.31■□□□□ 0.04
TRIM27-202ENST00000377199 OXSR1O95747 527 aaPredicted RBP15.3■□□□□ 0.04
TRIM27-202ENST00000377199 CD79BP40259 229 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 CASP3P42574 277 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 MAGEA8P43361 318 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 RORCP51449 518 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 CLDN2P57739 230 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 SNRPGP62308 76 aaKnown RBP15.3■□□□□ 0.04
TRIM27-202ENST00000377199 PRDX1Q06830 199 aaKnown RBP15.3■□□□□ 0.04
TRIM27-202ENST00000377199 FUT5Q11128 374 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 C1orf53Q5VUE5 145 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 C12orf73Q69YU5 71 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 FAM131AQ6UXB0 335 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 ACOT4Q8N9L9 421 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 CAMK1GQ96NX5 476 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 NELL2Q99435 816 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 MAN2C1Q9NTJ4 1040 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 HCN2Q9UL51 889 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 LSM2Q9Y333 95 aaKnown RBP15.3■□□□□ 0.04
TRIM27-202ENST00000377199 A6NL46 340 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 TP53P04637 393 aaPredicted RBP15.3■□□□□ 0.04
TRIM27-202ENST00000377199 HNRNPA1P09651 372 aaKnown RBP eCLIP15.3■□□□□ 0.04
TRIM27-202ENST00000377199 MYL12AP19105 171 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 HOXD12P35452 270 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 RHAGQ02094 409 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 TEKQ02763 1124 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 CHRNEQ04844 493 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 RPA4Q13156 261 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 ZNF311Q5JNZ3 666 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 SLC30A6Q6NXT4 461 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 OR4N5Q8IXE1 308 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 RAB42Q8N4Z0 105 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 NANOGP1Q8N7R0 232 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 ASB15Q8WXK1 588 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 ZNF582Q96NG8 517 aaPredicted RBP15.3■□□□□ 0.04
TRIM27-202ENST00000377199 MMP28Q9H239 520 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 STUB1Q9UNE7 303 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 ENTPD4Q9Y227 616 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 SNRNP200O75643 2136 aaKnown RBP15.3■□□□□ 0.04
TRIM27-202ENST00000377199 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.3■□□□□ 0.04
TRIM27-202ENST00000377199 LINC01553A4QN01 128 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 ARRDC5A6NEK1 342 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 ISM1B1AKI9 464 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 H3BQ06 376 aaPredicted RBP15.3■□□□□ 0.04
TRIM27-202ENST00000377199 SLC31A1O15431 190 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 SLITRK5O94991 958 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 LIMK1P53667 647 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 OR2B6P58173 313 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 TOR1AIP1Q5JTV8 583 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 VITQ6UXI7 678 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 ZNF730Q6ZMV8 503 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 SIMC1Q8NDZ2 872 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 RASSF5Q8WWW0 418 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 FAIM2Q9BWQ8 316 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 TBC1D24Q9ULP9 559 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 DNMT3AQ9Y6K1 912 aaPredicted RBP15.3■□□□□ 0.04
TRIM27-202ENST00000377199 GON4LQ3T8J9 2241 aa15.3■□□□□ 0.04
TRIM27-202ENST00000377199 A0A087WUU8 490 aa15.29■□□□□ 0.04
TRIM27-202ENST00000377199 A0A0A6YYD5 115 aa15.29■□□□□ 0.04
TRIM27-202ENST00000377199 FAM170BA6NMN3 283 aa15.29■□□□□ 0.04
TRIM27-202ENST00000377199 AIFM1O95831 613 aa15.29■□□□□ 0.04
TRIM27-202ENST00000377199 CSF2P04141 144 aa15.29■□□□□ 0.04
TRIM27-202ENST00000377199 SDC2P34741 201 aa15.29■□□□□ 0.04
TRIM27-202ENST00000377199 GPR4P46093 362 aa15.29■□□□□ 0.04
TRIM27-202ENST00000377199 RAB28P51157 221 aa15.29■□□□□ 0.04
TRIM27-202ENST00000377199 RPS25P62851 125 aaKnown RBP15.29■□□□□ 0.04
TRIM27-202ENST00000377199 INSL4Q14641 139 aa15.29■□□□□ 0.04
TRIM27-202ENST00000377199 CRTC2Q53ET0 693 aaPredicted RBP15.29■□□□□ 0.04
TRIM27-202ENST00000377199 TANGO2Q6ICL3 276 aa15.29■□□□□ 0.04
TRIM27-202ENST00000377199 KIAA1161Q6NSJ0 714 aa15.29■□□□□ 0.04
TRIM27-202ENST00000377199 ADAMTSL4Q6UY14 1074 aa15.29■□□□□ 0.04
TRIM27-202ENST00000377199 PRICKLE2Q7Z3G6 844 aa15.29■□□□□ 0.04
TRIM27-202ENST00000377199 TRIM69Q86WT6 500 aa15.29■□□□□ 0.04
TRIM27-202ENST00000377199 KIF18BQ86Y91 864 aa15.29■□□□□ 0.04
TRIM27-202ENST00000377199 OR52E1Q8NGJ3 308 aa15.29■□□□□ 0.04
TRIM27-202ENST00000377199 CREB3L4Q8TEY5 395 aa15.29■□□□□ 0.04
TRIM27-202ENST00000377199 NACC2Q96BF6 587 aa15.29■□□□□ 0.04
TRIM27-202ENST00000377199 ASB16Q96NS5 453 aa15.29■□□□□ 0.04
TRIM27-202ENST00000377199 SMAD5Q99717 465 aaKnown RBP15.29■□□□□ 0.04
TRIM27-202ENST00000377199 IGFLR1Q9H665 355 aa15.29■□□□□ 0.04
TRIM27-202ENST00000377199 DDX31Q9H8H2 851 aaKnown RBP15.29■□□□□ 0.04
TRIM27-202ENST00000377199 UGT2A1Q9Y4X1 527 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms