RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 OR13H1Q8NG92 308 aa19■□□□□ 0.63
VSX1-202ENST00000376709 PATE1Q8WXA2 126 aa19■□□□□ 0.63
VSX1-202ENST00000376709 LGALS12Q96DT0 336 aa19■□□□□ 0.63
VSX1-202ENST00000376709 TM4SF19Q96DZ7 209 aa19■□□□□ 0.63
VSX1-202ENST00000376709 PINK1Q9BXM7 581 aa19■□□□□ 0.63
VSX1-202ENST00000376709 CTPS2Q9NRF8 586 aa19■□□□□ 0.63
VSX1-202ENST00000376709 RHBDL2Q9NX52 303 aa19■□□□□ 0.63
VSX1-202ENST00000376709 ANKMY1Q9P2S6 941 aa19■□□□□ 0.63
VSX1-202ENST00000376709 SLC13A4Q9UKG4 626 aa19■□□□□ 0.63
VSX1-202ENST00000376709 EFCAB10A6NFE3 127 aa18.99■□□□□ 0.63
VSX1-202ENST00000376709 EFCAB9A8MZ26 197 aa18.99■□□□□ 0.63
VSX1-202ENST00000376709 TNFSF14O43557 240 aa18.99■□□□□ 0.63
VSX1-202ENST00000376709 ASNA1O43681 348 aa18.99■□□□□ 0.63
VSX1-202ENST00000376709 NADKO95544 446 aaPredicted RBP18.99■□□□□ 0.63
VSX1-202ENST00000376709 EPPINO95925 133 aa18.99■□□□□ 0.63
VSX1-202ENST00000376709 IGFBP1P08833 259 aaPredicted RBP18.99■□□□□ 0.63
VSX1-202ENST00000376709 CLK1P49759 484 aaKnown RBP18.99■□□□□ 0.63
VSX1-202ENST00000376709 FBXO43Q4G163 708 aa18.99■□□□□ 0.63
VSX1-202ENST00000376709 ZNF311Q5JNZ3 666 aa18.99■□□□□ 0.63
VSX1-202ENST00000376709 Q6ZS52 159 aa18.99■□□□□ 0.63
VSX1-202ENST00000376709 ADCK1Q86TW2 530 aa18.99■□□□□ 0.63
VSX1-202ENST00000376709 TRUB1Q8WWH5 349 aaKnown RBP18.99■□□□□ 0.63
VSX1-202ENST00000376709 PRRC1Q96M27 445 aa18.99■□□□□ 0.63
VSX1-202ENST00000376709 SERINC2Q96SA4 455 aa18.99■□□□□ 0.63
VSX1-202ENST00000376709 FUZQ9BT04 418 aa18.99■□□□□ 0.63
VSX1-202ENST00000376709 LIPT1Q9Y234 373 aa18.99■□□□□ 0.63
VSX1-202ENST00000376709 LRP4O75096 1905 aa18.99■□□□□ 0.63
VSX1-202ENST00000376709 B3GALT2O43825 422 aa18.99■□□□□ 0.63
VSX1-202ENST00000376709 TNFP01375 233 aa18.99■□□□□ 0.63
VSX1-202ENST00000376709 ADORA3P0DMS8 318 aa18.99■□□□□ 0.63
VSX1-202ENST00000376709 FCRL6Q6DN72 434 aa18.99■□□□□ 0.63
VSX1-202ENST00000376709 CASP12Q6UXS9 341 aa18.99■□□□□ 0.63
VSX1-202ENST00000376709 WDR53Q7Z5U6 358 aaPredicted RBP18.99■□□□□ 0.63
VSX1-202ENST00000376709 C10orf90Q96M02 699 aa18.99■□□□□ 0.63
VSX1-202ENST00000376709 ACTRT3Q9BYD9 372 aa18.99■□□□□ 0.63
VSX1-202ENST00000376709 C6orf106Q9H6K1 298 aaPredicted RBP18.99■□□□□ 0.63
VSX1-202ENST00000376709 CALML5Q9NZT1 146 aa18.99■□□□□ 0.63
VSX1-202ENST00000376709 HS3ST3A1Q9Y663 406 aa18.99■□□□□ 0.63
VSX1-202ENST00000376709 M0R082 166 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 ALPPP05187 535 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 ZNF10P21506 573 aaPredicted RBP18.98■□□□□ 0.63
VSX1-202ENST00000376709 TLX1P31314 330 aaPredicted RBP18.98■□□□□ 0.63
VSX1-202ENST00000376709 RANBP1P43487 201 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 RABIFP47224 123 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 MAN2A2P49641 1150 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 CHRNEQ04844 493 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 NR1D2Q14995 579 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 CHRDL2Q6WN34 429 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 Q6ZNX1 250 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 ABHD13Q7L211 337 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 DRAXINQ8NBI3 349 aaPredicted RBP18.98■□□□□ 0.63
VSX1-202ENST00000376709 CAMKVQ8NCB2 501 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 OR4K5Q8NGD3 323 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 OR4K14Q8NGD5 310 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 ADAMTS15Q8TE58 950 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 KLHL6Q8WZ60 621 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 RERGQ96A58 199 aaPredicted RBP18.98■□□□□ 0.63
VSX1-202ENST00000376709 ZHX1-C8orf76Q96EF9 292 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 TRNT1Q96Q11 434 aaKnown RBP18.98■□□□□ 0.63
VSX1-202ENST00000376709 SLC38A1Q9H2H9 487 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 CNOT2Q9NZN8 540 aaKnown RBP18.98■□□□□ 0.63
VSX1-202ENST00000376709 AIREO43918 545 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 CNOT3O75175 753 aaKnown RBP18.98■□□□□ 0.63
VSX1-202ENST00000376709 PTHP01270 115 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 EIF2S1P05198 315 aaKnown RBP18.98■□□□□ 0.63
VSX1-202ENST00000376709 IDUAP35475 653 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 TGFBR1P36897 503 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 COL9A2Q14055 689 aaPredicted RBP18.98■□□□□ 0.63
VSX1-202ENST00000376709 C6orf132Q5T0Z8 1188 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 SLX4IPQ5VYV7 408 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 IQCHQ86VS3 1027 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 SAMD14Q8IZD0 417 aaPredicted RBP18.98■□□□□ 0.63
VSX1-202ENST00000376709 SLC22A18ASQ8N1D0 253 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 DYNC2LI1Q8TCX1 351 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 SH3YL1Q96HL8 342 aaPredicted RBP18.98■□□□□ 0.63
VSX1-202ENST00000376709 ZFYVE21Q9BQ24 234 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 PALMDQ9NP74 551 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 MAN2C1Q9NTJ4 1040 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 KCMF1Q9P0J7 381 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 CPNE7Q9UBL6 633 aa18.98■□□□□ 0.63
VSX1-202ENST00000376709 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.97■□□□□ 0.63
VSX1-202ENST00000376709 LOC105369274A0A096LPK9 316 aa18.97■□□□□ 0.63
VSX1-202ENST00000376709 LOC102723532A0A0G2JNH3 316 aa18.97■□□□□ 0.63
VSX1-202ENST00000376709 C2orf74A8MZ97 194 aa18.97■□□□□ 0.63
VSX1-202ENST00000376709 PRAMEF26H0Y7S4 382 aa18.97■□□□□ 0.63
VSX1-202ENST00000376709 SLITRK5O94991 958 aa18.97■□□□□ 0.63
VSX1-202ENST00000376709 TNNI3P19429 210 aa18.97■□□□□ 0.63
VSX1-202ENST00000376709 SIM1P81133 766 aaPredicted RBP18.97■□□□□ 0.63
VSX1-202ENST00000376709 FAM111BQ6SJ93 734 aa18.97■□□□□ 0.63
VSX1-202ENST00000376709 OR4N5Q8IXE1 308 aa18.97■□□□□ 0.63
VSX1-202ENST00000376709 OR4N4Q8N0Y3 316 aa18.97■□□□□ 0.63
VSX1-202ENST00000376709 LINC00471Q8N535 108 aa18.97■□□□□ 0.63
VSX1-202ENST00000376709 TMCO5AQ8N6Q1 288 aa18.97■□□□□ 0.63
VSX1-202ENST00000376709 OR7G2Q8NG99 324 aa18.97■□□□□ 0.63
VSX1-202ENST00000376709 GIMAP5Q96F15 307 aa18.97■□□□□ 0.63
VSX1-202ENST00000376709 Q96MT0 163 aa18.97■□□□□ 0.63
VSX1-202ENST00000376709 MS4A4EQ96PG1 132 aa18.97■□□□□ 0.63
VSX1-202ENST00000376709 ALOXE3Q9BYJ1 711 aa18.97■□□□□ 0.63
VSX1-202ENST00000376709 HMG20AQ9NP66 347 aa18.97■□□□□ 0.63
VSX1-202ENST00000376709 POT1Q9NUX5 634 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms