RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 EXT1Q16394 746 aa21.33■■□□□ 1
HLA-C-202ENST00000376237 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.33■■□□□ 1
HLA-C-202ENST00000376237 MFSD12Q6NUT3 480 aa21.33■■□□□ 1
HLA-C-202ENST00000376237 NDUFAF7Q7L592 441 aa21.33■■□□□ 1
HLA-C-202ENST00000376237 ZNF248Q8NDW4 579 aa21.33■■□□□ 1
HLA-C-202ENST00000376237 TRIM8Q9BZR9 551 aa21.33■■□□□ 1
HLA-C-202ENST00000376237 SEMA4CQ9C0C4 833 aa21.33■■□□□ 1
HLA-C-202ENST00000376237 WDFY3Q8IZQ1 3526 aa21.32■■□□□ 1
HLA-C-202ENST00000376237 ASNA1O43681 348 aa21.32■■□□□ 1
HLA-C-202ENST00000376237 AGR2O95994 175 aa21.32■■□□□ 1
HLA-C-202ENST00000376237 COX6A1P12074 109 aa21.32■■□□□ 1
HLA-C-202ENST00000376237 ICAM2P13598 275 aa21.32■■□□□ 1
HLA-C-202ENST00000376237 EMDP50402 254 aa21.32■■□□□ 1
HLA-C-202ENST00000376237 SLC26A5P58743 744 aa21.32■■□□□ 1
HLA-C-202ENST00000376237 CLN3Q13286 438 aa21.32■■□□□ 1
HLA-C-202ENST00000376237 CDC73Q6P1J9 531 aa21.32■■□□□ 1
HLA-C-202ENST00000376237 SIMC1Q8NDZ2 872 aa21.32■■□□□ 1
HLA-C-202ENST00000376237 OR10A6Q8NH74 314 aa21.32■■□□□ 1
HLA-C-202ENST00000376237 VMP1Q96GC9 406 aa21.32■■□□□ 1
HLA-C-202ENST00000376237 IMMP1LQ96LU5 166 aa21.32■■□□□ 1
HLA-C-202ENST00000376237 MESP1Q9BRJ9 268 aa21.32■■□□□ 1
HLA-C-202ENST00000376237 TMEM121BQ9BXQ6 578 aaPredicted RBP21.32■■□□□ 1
HLA-C-202ENST00000376237 EQTNQ9NQ60 294 aa21.32■■□□□ 1
HLA-C-202ENST00000376237 GIN1Q9NXP7 522 aa21.32■■□□□ 1
HLA-C-202ENST00000376237 HEMK1Q9Y5R4 338 aaPredicted RBP21.32■■□□□ 1
HLA-C-202ENST00000376237 MRPS18BQ9Y676 258 aaKnown RBP21.32■■□□□ 1
HLA-C-202ENST00000376237 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.32■■□□□ 1
HLA-C-202ENST00000376237 NUP214P35658 2090 aaPredicted RBP21.31■■□□□ 1
HLA-C-202ENST00000376237 NSG1A0A0A6YYJ2 146 aa21.31■■□□□ 1
HLA-C-202ENST00000376237 PEX12O00623 359 aa21.31■■□□□ 1
HLA-C-202ENST00000376237 C1QCP02747 245 aa21.31■■□□□ 1
HLA-C-202ENST00000376237 BMP2P12643 396 aa21.31■■□□□ 1
HLA-C-202ENST00000376237 KHKP50053 298 aa21.31■■□□□ 1
HLA-C-202ENST00000376237 LIPEQ05469 1076 aa21.31■■□□□ 1
HLA-C-202ENST00000376237 DUSP8Q13202 625 aa21.31■■□□□ 1
HLA-C-202ENST00000376237 MYBPC3Q14896 1274 aa21.31■■□□□ 1
HLA-C-202ENST00000376237 ZNHIT3Q15649 155 aaPredicted RBP21.31■■□□□ 1
HLA-C-202ENST00000376237 LGI4Q8N135 537 aa21.31■■□□□ 1
HLA-C-202ENST00000376237 C16orf52Q8NHV5 167 aa21.31■■□□□ 1
HLA-C-202ENST00000376237 SNIP1Q8TAD8 396 aaKnown RBP21.31■■□□□ 1
HLA-C-202ENST00000376237 ADAMTS17Q8TE56 1095 aa21.31■■□□□ 1
HLA-C-202ENST00000376237 NCLNQ969V3 563 aa21.31■■□□□ 1
HLA-C-202ENST00000376237 NUDT9Q9BW91 350 aa21.31■■□□□ 1
HLA-C-202ENST00000376237 DPH1Q9BZG8 443 aa21.31■■□□□ 1
HLA-C-202ENST00000376237 ALG2Q9H553 416 aa21.31■■□□□ 1
HLA-C-202ENST00000376237 CD300AQ9UGN4 299 aa21.31■■□□□ 1
HLA-C-202ENST00000376237 PCDHGB3Q9Y5G1 929 aa21.31■■□□□ 1
HLA-C-202ENST00000376237 CLPSP04118 112 aa21.3■■□□□ 1
HLA-C-202ENST00000376237 HSD17B1P14061 328 aa21.3■■□□□ 1
HLA-C-202ENST00000376237 IL10RAQ13651 578 aa21.3■■□□□ 1
HLA-C-202ENST00000376237 PIGGQ5H8A4 983 aa21.3■■□□□ 1
HLA-C-202ENST00000376237 COX20Q5RI15 118 aa21.3■■□□□ 1
HLA-C-202ENST00000376237 PLAG1Q6DJT9 500 aa21.3■■□□□ 1
HLA-C-202ENST00000376237 MRGPREQ86SM8 312 aa21.3■■□□□ 1
HLA-C-202ENST00000376237 CALHM3Q86XJ0 350 aa21.3■■□□□ 1
HLA-C-202ENST00000376237 KIF2BQ8N4N8 673 aa21.3■■□□□ 1
HLA-C-202ENST00000376237 APCDD1LQ8NCL9 501 aa21.3■■□□□ 1
HLA-C-202ENST00000376237 OR8K3Q8NH51 312 aa21.3■■□□□ 1
HLA-C-202ENST00000376237 M1APQ8TC57 530 aa21.3■■□□□ 1
HLA-C-202ENST00000376237 ADAMTS15Q8TE58 950 aa21.3■■□□□ 1
HLA-C-202ENST00000376237 KCNE4Q8WWG9 221 aa21.3■■□□□ 1
HLA-C-202ENST00000376237 HOXB13Q92826 284 aaPredicted RBP21.3■■□□□ 1
HLA-C-202ENST00000376237 C16orf58Q96GQ5 468 aa21.3■■□□□ 1
HLA-C-202ENST00000376237 VSTM2LQ96N03 204 aa21.3■■□□□ 1
HLA-C-202ENST00000376237 ZNF583Q96ND8 569 aa21.3■■□□□ 1
HLA-C-202ENST00000376237 STACQ99469 402 aa21.3■■□□□ 1
HLA-C-202ENST00000376237 DCHS1Q96JQ0 3298 aa21.3■■□□□ 1
HLA-C-202ENST00000376237 PRORSD1PA6NEY8 169 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 HPP00738 406 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 ETFAP13804 333 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 MAP3K8P41279 467 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 MAN2A2P49641 1150 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 CLCN2P51788 898 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 DSTNP60981 165 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 DCAF7P61962 342 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 RPS26P62854 115 aaKnown RBP21.29■■□□□ 1
HLA-C-202ENST00000376237 RBBP4Q09028 425 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 CYP51A1Q16850 503 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 EXOSC6Q5RKV6 272 aaKnown RBP21.29■■□□□ 1
HLA-C-202ENST00000376237 HSDL2Q6YN16 418 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 SLC29A4Q7RTT9 530 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 NET1Q7Z628 596 aaPredicted RBP21.29■■□□□ 1
HLA-C-202ENST00000376237 HORMAD2Q8N7B1 307 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 ZNF321PQ8N8H1 164 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 TNIP2Q8NFZ5 429 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 JADE3Q92613 823 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 LMF2Q9BU23 707 aaKnown RBP21.29■■□□□ 1
HLA-C-202ENST00000376237 OR51I1Q9H343 314 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 PIGUQ9H490 435 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 TMEM38AQ9H6F2 299 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 FOLH1BQ9HBA9 442 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 DUSP22Q9NRW4 184 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 WDR70Q9NW82 654 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 P4HTMQ9NXG6 502 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 CCDC88CQ9P219 2028 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 SPTBN4Q9H254 2564 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 TNFRSF21O75509 655 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 ALOX5P09917 674 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 ME2P23368 584 aa21.29■■□□□ 1
HLA-C-202ENST00000376237 GSK3BP49841 420 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms