RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 LASP1Q14847 261 aaKnown RBP13.71□□□□□ -0.21
MSH5-201ENST00000375703 PLK5Q496M5 336 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 GPAT3Q53EU6 434 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 PDZK1Q5T2W1 519 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 HSDL2Q6YN16 418 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 KIF18BQ86Y91 864 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 SFTPA1Q8IWL2 248 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 ETFBKMTQ8IXQ9 262 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 POF1BQ8WVV4 589 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 FGF11Q92914 225 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 TRIM43Q96BQ3 446 aaPredicted RBP13.71□□□□□ -0.21
MSH5-201ENST00000375703 RSPRY1Q96DX4 576 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 RNFT2Q96EX2 444 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 PRR14Q9BWN1 585 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 PLA2G12AQ9BZM1 189 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 SAP130Q9H0E3 1048 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 KLHL31Q9H511 634 aa13.71□□□□□ -0.21
MSH5-201ENST00000375703 SNTNA6NMZ2 147 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 STK25O00506 426 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 TFECO14948 347 aaPredicted RBP13.7□□□□□ -0.22
MSH5-201ENST00000375703 TMCC2O75069 709 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 STATHP02808 62 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 HMGN2P05204 90 aaKnown RBP13.7□□□□□ -0.22
MSH5-201ENST00000375703 ANXA11P50995 505 aaKnown RBP13.7□□□□□ -0.22
MSH5-201ENST00000375703 UBE3AQ05086 875 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 RAB40BQ12829 278 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 GNA13Q14344 377 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 SLC9A5Q14940 896 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 CRTC2Q53ET0 693 aaPredicted RBP13.7□□□□□ -0.22
MSH5-201ENST00000375703 ZNF793Q6ZN11 406 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 CCDC116Q8IYX3 515 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 TMEM163Q8TC26 289 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 PHOX2BQ99453 314 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 MRPS18AQ9NVS2 196 aaKnown RBP13.7□□□□□ -0.22
MSH5-201ENST00000375703 GPR52Q9Y2T5 361 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 YARS2Q9Y2Z4 477 aaKnown RBP13.7□□□□□ -0.22
MSH5-201ENST00000375703 A0A087WUU8 490 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 A0A0G2JPF8 293 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 MEIOCA2RUB1 952 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 IGLON5A6NGN9 336 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 HNRNPCL2B2RXH8 293 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 HNRNPCL3B7ZW38 293 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 FAM47E-STBD1D6RA91 191 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 MAN2B1O00754 1011 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 PGRMC2O15173 223 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 PRODHO43272 600 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 HNRNPCL4P0DMR1 293 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 GAS1P54826 345 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 RPS25P62851 125 aaKnown RBP13.7□□□□□ -0.22
MSH5-201ENST00000375703 PRDX1Q06830 199 aaKnown RBP13.7□□□□□ -0.22
MSH5-201ENST00000375703 SLC27A4Q6P1M0 643 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 BHLHB9Q6PI77 547 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 SLC36A4Q6YBV0 504 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 PRICKLE2Q7Z3G6 844 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 RAB42Q8N4Z0 105 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 FAM181AQ8N9Y4 354 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 SUN3Q8TAQ9 357 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 TEX47Q8TBZ9 253 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 TM9SF4Q92544 642 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 MACROD1Q9BQ69 325 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 MCOLN1Q9GZU1 580 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 AICDAQ9GZX7 198 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 SLC22A4Q9H015 551 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 QRSL1Q9H0R6 528 aaKnown RBP13.7□□□□□ -0.22
MSH5-201ENST00000375703 MMP28Q9H239 520 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 FGF20Q9NP95 211 aaPredicted RBP13.7□□□□□ -0.22
MSH5-201ENST00000375703 ZDHHC4Q9NPG8 344 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 TOR4AQ9NXH8 423 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 DNMT3AQ9Y6K1 912 aaPredicted RBP13.7□□□□□ -0.22
MSH5-201ENST00000375703 KIAA1549LQ6ZVL6 1849 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 NOTCH4Q99466 2003 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 IRGMA1A4Y4 181 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 SMIM30A4D0T7 59 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 OTOL1A6NHN0 477 aaPredicted RBP13.7□□□□□ -0.22
MSH5-201ENST00000375703 SLC30A4O14863 429 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 RGS13O14921 159 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 MTNR1AP48039 350 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 MAN2A2P49641 1150 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 TAS2R41P59536 307 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 HTRA4P83105 476 aaPredicted RBP13.7□□□□□ -0.22
MSH5-201ENST00000375703 FUT5Q11128 374 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 SLAMF1Q13291 335 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 TPBGQ13641 420 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 ZNF750Q32MQ0 723 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 DDI2Q5TDH0 399 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 C11orf74Q86VG3 221 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 CAMKK1Q8N5S9 505 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 GNPDA2Q8TDQ7 276 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 ST6GAL2Q96JF0 529 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 PINK1Q9BXM7 581 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 XKR8Q9H6D3 395 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 SNX7Q9UNH6 387 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 GSTK1Q9Y2Q3 226 aa13.7□□□□□ -0.22
MSH5-201ENST00000375703 MKI67P46013 3256 aaKnown RBP13.69□□□□□ -0.22
MSH5-201ENST00000375703 IGKV1-8A0A0C4DH67 115 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 TMEM129A0AVI4 362 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 CENPXA8MT69 81 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 A8MV72 311 aaPredicted RBP13.69□□□□□ -0.22
MSH5-201ENST00000375703 LRRTM2O43300 516 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 FHP07954 510 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms