RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 MLIPQ5VWP3 458 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 SLC6A19Q695T7 634 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 ZNF549Q6P9A3 640 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 PLD6Q8N2A8 252 aaKnown RBP6.47□□□□□ -1.37
CSDE1-204ENST00000369530 FAM156AQ8NDB6 213 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 OR6M1Q8NGM8 313 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 PPP3R2Q96LZ3 170 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 CDC6Q99741 560 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 NPAS2Q99743 824 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 GPR63Q9BZJ6 419 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 CIPCQ9C0C6 399 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 RNF32Q9H0A6 362 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 ZNF768Q9H5H4 540 aaKnown RBP6.47□□□□□ -1.37
CSDE1-204ENST00000369530 ACOT13Q9NPJ3 140 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 ERVK-18Q9QC07 812 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 PFDN2Q9UHV9 154 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 PLEKHM1Q9Y4G2 1056 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 CLDN16Q9Y5I7 305 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 IGKV1-8A0A0C4DH67 115 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 WRBO00258 174 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 NDUFS3O75489 264 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 CCNDBP1O95273 360 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 CLDN7O95471 211 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 FGF2P09038 288 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 THEGLP0DJG4 465 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 PRF1P14222 555 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 HK1P19367 917 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 CD53P19397 219 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 RPL14P50914 215 aaKnown RBP6.47□□□□□ -1.37
CSDE1-204ENST00000369530 CD47Q08722 323 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 IRF3Q14653 427 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 ETFDHQ16134 617 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 FAM180BQ6P0A1 224 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 TBPL2Q6SJ96 375 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 OR56A4Q8NGH8 313 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 SKA2Q8WVK7 121 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-204ENST00000369530 MARK4Q96L34 752 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 SRRQ9GZT4 340 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 ILKAPQ9H0C8 392 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-204ENST00000369530 WNT5BQ9H1J7 359 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 SEBOXQ9HB31 216 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-204ENST00000369530 NSMCE4AQ9NXX6 385 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 RPH3AQ9Y2J0 694 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-204ENST00000369530 PRSS21Q9Y6M0 314 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 UTP20O75691 2785 aaKnown RBP6.47□□□□□ -1.37
CSDE1-204ENST00000369530 TRAV20A0A0B4J274 112 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 RNF103-CHMP3A0A140T963 221 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 TRABD2BA6NFA1 517 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 SLC9B1P1A6NJY1 282 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 UBXN8O00124 270 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 HYAL3O43820 417 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-204ENST00000369530 SNAPC5O75971 98 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 SOX30O94993 753 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 TP53P04637 393 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-204ENST00000369530 FBP1P09467 338 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 GLB1P16278 677 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 SPI1P17947 270 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 TSPAN8P19075 237 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 MYL9P24844 172 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 POU3F4P49335 361 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 CLCN7P51798 805 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 ERVPABLB-1P60509 514 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 SEMG2Q02383 582 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 ACY1Q03154 408 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 PRKAA1Q13131 559 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 CLN3Q13286 438 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 BTN1A1Q13410 526 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 EIF2S3LQ2VIR3 472 aaKnown RBP6.47□□□□□ -1.37
CSDE1-204ENST00000369530 AP5B1Q2VPB7 878 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 ALKBH2Q6NS38 261 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 CNSTQ6PJW8 725 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 EFL1Q7Z2Z2 1120 aaKnown RBP6.47□□□□□ -1.37
CSDE1-204ENST00000369530 GLT6D1Q7Z4J2 308 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 MCATQ8IVS2 390 aaKnown RBP6.47□□□□□ -1.37
CSDE1-204ENST00000369530 PIANPQ8IYJ0 282 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 ACVR1CQ8NER5 493 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 OR52E4Q8NGH9 312 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 OR13C4Q8NGS5 318 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 ASB15Q8WXK1 588 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 MRPL48Q96GC5 212 aaKnown RBP6.47□□□□□ -1.37
CSDE1-204ENST00000369530 FRMD6Q96NE9 622 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 SLC46A1Q96NT5 459 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 PPP1R2P1Q96PQ5 205 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 TRIM8Q9BZR9 551 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 AICDAQ9GZX7 198 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 RANBP3Q9H6Z4 567 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-204ENST00000369530 TRIM45Q9H8W5 580 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-204ENST00000369530 OXSMQ9NWU1 459 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 XPR1Q9UBH6 696 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 MID2Q9UJV3 735 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 PCDHB9Q9Y5E1 797 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 ARL5AQ9Y689 179 aa6.47□□□□□ -1.37
CSDE1-204ENST00000369530 IGHV5-10-1A0A0J9YXX1 117 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 CIB4A0PJX0 185 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 E5RI56 91 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 E2F3O00716 465 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 TSC22D2O75157 780 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 KLHL18O94889 574 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 IFNA7P01567 189 aa6.46□□□□□ -1.37
CSDE1-204ENST00000369530 APOA4P06727 396 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms