RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 UBL7Q96S82 380 aaPredicted RBP18.01■□□□□ 0.47
CMTM3-201ENST00000361909 PRR14Q9BWN1 585 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 GPATCH2Q9NW75 528 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 MGAT4AQ9UM21 535 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 A0A1B0GVI7 797 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 SH3BP5O60239 455 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 ADH5P11766 374 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 CTSOP43234 321 aaPredicted RBP18.01■□□□□ 0.47
CMTM3-201ENST00000361909 SMIM11AP58511 58 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 CRTC2Q53ET0 693 aaPredicted RBP18.01■□□□□ 0.47
CMTM3-201ENST00000361909 TCEAL5Q5H9L2 206 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 PRICKLE2Q7Z3G6 844 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 ZNF366Q8N895 744 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 HUS1BQ8NHY5 278 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 ASB11Q8WXH4 323 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 PHF21AQ96BD5 680 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 ATF6BQ99941 703 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 CPEB1Q9BZB8 566 aaKnown RBP18.01■□□□□ 0.47
CMTM3-201ENST00000361909 ZFP64Q9NPA5 681 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 ZSCAN32Q9NX65 697 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 UBQLN2Q9UHD9 624 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 SLC22A14Q9Y267 594 aa18.01■□□□□ 0.47
CMTM3-201ENST00000361909 EXOSC1Q9Y3B2 195 aaKnown RBP18.01■□□□□ 0.47
CMTM3-201ENST00000361909 RANBP2P49792 3224 aaKnown RBP18.01■□□□□ 0.47
CMTM3-201ENST00000361909 LOC102723532A0A0G2JNH3 316 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 CASKO14936 926 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 PLOD3O60568 738 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 HPGDSO60760 199 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 PRAMEF4O60810 478 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 NFATC1O95644 943 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 RRASP10301 218 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 RPS25P62851 125 aaKnown RBP18■□□□□ 0.47
CMTM3-201ENST00000361909 RAB40BQ12829 278 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 GALEQ14376 348 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 PTPRRQ15256 657 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 ZXDCQ2QGD7 858 aaPredicted RBP18■□□□□ 0.47
CMTM3-201ENST00000361909 COX20Q5RI15 118 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 PRAMEF9Q5VWM5 478 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 ZNF57Q68EA5 555 aaPredicted RBP18■□□□□ 0.47
CMTM3-201ENST00000361909 TYW3Q6IPR3 259 aaKnown RBP18■□□□□ 0.47
CMTM3-201ENST00000361909 GRHL2Q6ISB3 625 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 C22orf39Q6P5X5 142 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 ADGRF3Q8IZF5 1079 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 WFIKKN2Q8TEU8 576 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 TM9SF4Q92544 642 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 OTULINQ96BN8 352 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 HEXA-AS1Q9H8Q6 139 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 ZDHHC3Q9NYG2 299 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 SLC27A6Q9Y2P4 619 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 RPS10-NUDT3A0A1W2PQS6 291 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 HEPACAM2A8MVW5 462 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 CISD3P0C7P0 127 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 BPIP17213 487 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 TIA1P31483 386 aaKnown RBP eCLIP18■□□□□ 0.473e-6■■■□□ 18.3
CMTM3-201ENST00000361909 BDKRB1P46663 353 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 PNLIPRP1P54315 467 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 RAB14P61106 215 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 RAE1P78406 368 aaKnown RBP18■□□□□ 0.47
CMTM3-201ENST00000361909 SNTA1Q13424 505 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 P2RY14Q15391 338 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 PLA1AQ53H76 456 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 DCST1Q5T197 706 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 GET4Q7L5D6 327 aaPredicted RBP18■□□□□ 0.47
CMTM3-201ENST00000361909 PRSS42Q7Z5A4 293 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 GPAT4Q86UL3 456 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 TCEANCQ8N8B7 351 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 OR2M2Q96R28 347 aa18■□□□□ 0.47
CMTM3-201ENST00000361909 H3BN98 237 aa17.99■□□□□ 0.47
CMTM3-201ENST00000361909 GALP22466 123 aa17.99■□□□□ 0.47
CMTM3-201ENST00000361909 SERPINA4P29622 427 aa17.99■□□□□ 0.47
CMTM3-201ENST00000361909 ETV5P41161 510 aa17.99■□□□□ 0.47
CMTM3-201ENST00000361909 ETV1P50549 477 aa17.99■□□□□ 0.47
CMTM3-201ENST00000361909 COX10Q12887 443 aa17.99■□□□□ 0.47
CMTM3-201ENST00000361909 PDGFRLQ15198 375 aa17.99■□□□□ 0.47
CMTM3-201ENST00000361909 BRAT1Q6PJG6 821 aa17.99■□□□□ 0.47
CMTM3-201ENST00000361909 PAQR6Q6TCH4 344 aa17.99■□□□□ 0.47
CMTM3-201ENST00000361909 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.99■□□□□ 0.47
CMTM3-201ENST00000361909 SCMH1Q96GD3 660 aa17.99■□□□□ 0.47
CMTM3-201ENST00000361909 MSANTD3Q96H12 275 aa17.99■□□□□ 0.47
CMTM3-201ENST00000361909 POLR2J3Q9H1A7 115 aaKnown RBP17.99■□□□□ 0.47
CMTM3-201ENST00000361909 REEP4Q9H6H4 257 aa17.99■□□□□ 0.47
CMTM3-201ENST00000361909 CSNK1G3Q9Y6M4 447 aa17.99■□□□□ 0.47
CMTM3-201ENST00000361909 A0A0A6YYJ9 748 aa17.98■□□□□ 0.47
CMTM3-201ENST00000361909 TRBV4-1A0A0J9YWV2 114 aa17.98■□□□□ 0.47
CMTM3-201ENST00000361909 LINC01565O15544 149 aa17.98■□□□□ 0.47
CMTM3-201ENST00000361909 LZTS3O60299 673 aaPredicted RBP17.98■□□□□ 0.47
CMTM3-201ENST00000361909 POP4O95707 220 aaKnown RBP17.98■□□□□ 0.47
CMTM3-201ENST00000361909 SOD1P00441 154 aa17.98■□□□□ 0.47
CMTM3-201ENST00000361909 ALPIP09923 528 aa17.98■□□□□ 0.47
CMTM3-201ENST00000361909 DGKGP49619 791 aa17.98■□□□□ 0.47
CMTM3-201ENST00000361909 HBA1P69905 142 aa17.98■□□□□ 0.47
CMTM3-201ENST00000361909 FCN2Q15485 313 aa17.98■□□□□ 0.47
CMTM3-201ENST00000361909 CHRNA6Q15825 494 aa17.98■□□□□ 0.47
CMTM3-201ENST00000361909 ZNF284Q2VY69 593 aa17.98■□□□□ 0.47
CMTM3-201ENST00000361909 CD300LDQ6UXZ3 194 aa17.98■□□□□ 0.47
CMTM3-201ENST00000361909 CEACAM20Q6UY09 585 aa17.98■□□□□ 0.47
CMTM3-201ENST00000361909 PLEKHM3Q6ZWE6 761 aa17.98■□□□□ 0.47
CMTM3-201ENST00000361909 LINC00471Q8N535 108 aa17.98■□□□□ 0.47
CMTM3-201ENST00000361909 OR8K5Q8NH50 307 aa17.98■□□□□ 0.47
CMTM3-201ENST00000361909 APOBEC4Q8WW27 367 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms