RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 MVB12BQ9H7P6 319 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 BRF2Q9HAW0 419 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 IL21RQ9HBE5 538 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 ACOT13Q9NPJ3 140 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 SDHAF3Q9NRP4 125 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 NUFIP1Q9UHK0 495 aaKnown RBP13.04□□□□□ -0.32
VCP-201ENST00000358901 ALG5Q9Y673 324 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 AGAP5A6NIR3 686 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 ADAM12O43184 909 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 FMO6PO60774 539 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 JRKO75564 520 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 NUDT7P0C024 238 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 HRH2P25021 359 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 WNT4P56705 351 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 SEMA3BQ13214 749 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 MAPK14Q16539 360 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 ZNF691Q5VV52 312 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 CBLL1Q75N03 491 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 TAS1R1Q7RTX1 841 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 TMPRSS9Q7Z410 1059 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 CPOQ8IVL8 374 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 OR5J2Q8NH18 312 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 PRTFDC1Q9NRG1 225 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 HCN3Q9P1Z3 774 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 HCSTQ9UBK5 93 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 MRPS17Q9Y2R5 130 aaKnown RBP13.04□□□□□ -0.32
VCP-201ENST00000358901 PCDHGA3Q9Y5H0 932 aa13.04□□□□□ -0.32
VCP-201ENST00000358901 ANTXRLA6NF34 631 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 C12orf71A8MTZ7 269 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 RNF13O43567 381 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 SPARCP09486 303 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 ERP29P30040 261 aaKnown RBP13.03□□□□□ -0.32
VCP-201ENST00000358901 CXCR4P61073 352 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 C1orf61Q13536 156 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 GRIN2CQ14957 1233 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 GRK1Q15835 563 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 NHSL2Q5HYW2 709 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 RPL13AP3Q6NVV1 102 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 GDPGP1Q6ZNW5 385 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 TCEAL8Q8IYN2 117 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 CYB561A3Q8NBI2 242 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 TREM1Q9NP99 234 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 CPED1A4D0V7 1026 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 RNASET2O00584 256 aaKnown RBP13.03□□□□□ -0.32
VCP-201ENST00000358901 ITGA5P08648 1049 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 ADRB3P13945 408 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 SSTR4P31391 388 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 CDKN2CP42773 168 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 RAB12Q6IQ22 244 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 B3GNT8Q7Z7M8 397 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 GDPD1Q8N9F7 314 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 POGLUT1Q8NBL1 392 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 OR4K13Q8NH42 304 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 MSANTD3Q96H12 275 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 RBP7Q96R05 134 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 FZD3Q9NPG1 666 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 CSNK1G3Q9Y6M4 447 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 CRYBG1Q9Y4K1 1723 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 CHD4Q14839 1912 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 TMEM189-UBE2V1I3L0A0 370 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 GTF2F2P13984 249 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 DRD5P21918 477 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 RGS6P49758 472 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 ABCA11PQ4W5N1 156 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 EIF5AL1Q6IS14 154 aaKnown RBP13.03□□□□□ -0.32
VCP-201ENST00000358901 PLCZ1Q86YW0 608 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 MS4A15Q8N5U1 240 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 OR5D16Q8NGK9 328 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 WDR20Q8TBZ3 569 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 ASB11Q8WXH4 323 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 PDLIM5Q96HC4 596 aaKnown RBP13.03□□□□□ -0.32
VCP-201ENST00000358901 MAELQ96JY0 434 aaKnown RBP13.03□□□□□ -0.32
VCP-201ENST00000358901 SAMD8Q96LT4 415 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 KLF16Q9BXK1 252 aaPredicted RBP13.03□□□□□ -0.32
VCP-201ENST00000358901 DMRT3Q9NQL9 472 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 KLRF1Q9NZS2 232 aa13.03□□□□□ -0.32
VCP-201ENST00000358901 A0A0G2JPF8 293 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 HEPACAM2A8MVW5 462 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 C2orf74A8MZ97 194 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 HNRNPCL3B7ZW38 293 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 MRPS14O60783 128 aaKnown RBP13.02□□□□□ -0.32
VCP-201ENST00000358901 SOX30O94993 753 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 CDK1P06493 297 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 H2AFB2P0C5Z0 115 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 HNRNPCL4P0DMR1 293 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 PCSK6P29122 969 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 TRAM1Q15629 374 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 SFRP4Q6FHJ7 346 aaPredicted RBP13.02□□□□□ -0.32
VCP-201ENST00000358901 NADSYN1Q6IA69 706 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 DUS1LQ6P1R4 473 aaKnown RBP13.02□□□□□ -0.32
VCP-201ENST00000358901 SPRED1Q7Z699 444 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 ELMOD2Q8IZ81 293 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 OR52E2Q8NGJ4 325 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 OR2T11Q8NH01 316 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 THAP4Q8WY91 577 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 WDR92Q96MX6 357 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 ZNF471Q9BX82 626 aaPredicted RBP13.02□□□□□ -0.32
VCP-201ENST00000358901 ZNF717Q9BY31 904 aaPredicted RBP13.02□□□□□ -0.32
VCP-201ENST00000358901 MMP28Q9H239 520 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 PRELID1Q9Y255 219 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms