RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 SETD9Q8NE22 299 aa17.32■□□□□ 0.36
TRIM41-202ENST00000351937 AHCYL2Q96HN2 611 aaKnown RBP17.32■□□□□ 0.36
TRIM41-202ENST00000351937 PSD2Q9BQI7 771 aa17.32■□□□□ 0.36
TRIM41-202ENST00000351937 LIN28AQ9H9Z2 209 aaKnown RBP17.32■□□□□ 0.36
TRIM41-202ENST00000351937 A0A0A6YYC8 382 aaPredicted RBP17.32■□□□□ 0.36
TRIM41-202ENST00000351937 I3L1I5 382 aaPredicted RBP17.32■□□□□ 0.36
TRIM41-202ENST00000351937 GNSP15586 552 aa17.32■□□□□ 0.36
TRIM41-202ENST00000351937 SOX18P35713 384 aa17.32■□□□□ 0.36
TRIM41-202ENST00000351937 ARRB1P49407 418 aaPredicted RBP17.32■□□□□ 0.36
TRIM41-202ENST00000351937 COL9A2Q14055 689 aaPredicted RBP17.32■□□□□ 0.36
TRIM41-202ENST00000351937 RBM48Q5RL73 367 aaKnown RBP17.32■□□□□ 0.36
TRIM41-202ENST00000351937 FHL5Q5TD97 284 aa17.32■□□□□ 0.36
TRIM41-202ENST00000351937 HEPHL1Q6MZM0 1159 aa17.32■□□□□ 0.36
TRIM41-202ENST00000351937 TCTN3Q6NUS6 607 aa17.32■□□□□ 0.36
TRIM41-202ENST00000351937 C16orf62Q7Z3J2 963 aa17.32■□□□□ 0.36
TRIM41-202ENST00000351937 SHISA5Q8N114 240 aa17.32■□□□□ 0.36
TRIM41-202ENST00000351937 PHF10Q8WUB8 498 aaKnown RBP17.32■□□□□ 0.36
TRIM41-202ENST00000351937 HDAC2Q92769 488 aaKnown RBP17.32■□□□□ 0.36
TRIM41-202ENST00000351937 ANKRD9Q96BM1 317 aaPredicted RBP17.32■□□□□ 0.36
TRIM41-202ENST00000351937 SLC35A4Q96G79 324 aa17.32■□□□□ 0.36
TRIM41-202ENST00000351937 FAM210AQ96ND0 272 aa17.32■□□□□ 0.36
TRIM41-202ENST00000351937 ELF4Q99607 663 aaPredicted RBP17.32■□□□□ 0.36
TRIM41-202ENST00000351937 HSPE1-MOB4S4R3N1 261 aa17.32■□□□□ 0.36
TRIM41-202ENST00000351937 CASC3O15234 703 aaKnown RBP17.31■□□□□ 0.36
TRIM41-202ENST00000351937 FOXS1O43638 330 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 PLOD3O60568 738 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 TRMUO75648 421 aaKnown RBP17.31■□□□□ 0.36
TRIM41-202ENST00000351937 GLB1P16278 677 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 ELK4P28324 431 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 MAPK10P53779 464 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 COLEC12Q5KU26 742 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 WDR5BQ86VZ2 330 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 SLC5A8Q8N695 610 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 ZNF675Q8TD23 568 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 ADAMTS16Q8TE57 1224 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 TMEM165Q9HC07 324 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 USP34Q70CQ2 3546 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 DSPPQ9NZW4 1301 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 IGHV1OR21-1A0A087WYE8 117 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 HYKKA2RU49 373 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 BLACEA4D250 179 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 FFAR1O14842 300 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 NSA2O95478 260 aaKnown RBP17.31■□□□□ 0.36
TRIM41-202ENST00000351937 NT5EP21589 574 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 GPR3P46089 330 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 DHPSP49366 369 aaPredicted RBP17.31■□□□□ 0.36
TRIM41-202ENST00000351937 CLK3P49761 638 aaKnown RBP17.31■□□□□ 0.36
TRIM41-202ENST00000351937 HLCSP50747 726 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 OR1D5P58170 312 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 NPRL3Q12980 569 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 GANABQ14697 944 aaKnown RBP17.31■□□□□ 0.36
TRIM41-202ENST00000351937 TRMT12Q53H54 448 aaKnown RBP17.31■□□□□ 0.36
TRIM41-202ENST00000351937 SLC35F3Q8IY50 421 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 ALDH16A1Q8IZ83 802 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 SLC16A11Q8NCK7 471 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 PINK1Q9BXM7 581 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 GABARAPL3Q9BY60 117 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 SLC38A1Q9H2H9 487 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 NDRG4Q9ULP0 352 aaKnown RBP17.31■□□□□ 0.36
TRIM41-202ENST00000351937 SLC9A8Q9Y2E8 581 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 HCN4Q9Y3Q4 1203 aa17.31■□□□□ 0.36
TRIM41-202ENST00000351937 ARRDC5A6NEK1 342 aa17.3■□□□□ 0.36
TRIM41-202ENST00000351937 SLC35E2P0CK97 266 aa17.3■□□□□ 0.36
TRIM41-202ENST00000351937 RNH1P13489 461 aaKnown RBP17.3■□□□□ 0.36
TRIM41-202ENST00000351937 CD47Q08722 323 aa17.3■□□□□ 0.36
TRIM41-202ENST00000351937 PRICKLE4Q2TBC4 344 aa17.3■□□□□ 0.36
TRIM41-202ENST00000351937 C6orf141Q5SZD1 244 aa17.3■□□□□ 0.36
TRIM41-202ENST00000351937 OLIG3Q7RTU3 272 aa17.3■□□□□ 0.36
TRIM41-202ENST00000351937 CHDHQ8NE62 594 aaPredicted RBP17.3■□□□□ 0.36
TRIM41-202ENST00000351937 ADAMTS18Q8TE60 1221 aa17.3■□□□□ 0.36
TRIM41-202ENST00000351937 FBLIM1Q8WUP2 373 aa17.3■□□□□ 0.36
TRIM41-202ENST00000351937 PRMT8Q9NR22 394 aaPredicted RBP17.3■□□□□ 0.36
TRIM41-202ENST00000351937 PCDH17O14917 1159 aa17.3■□□□□ 0.36
TRIM41-202ENST00000351937 CCNB2O95067 398 aa17.3■□□□□ 0.36
TRIM41-202ENST00000351937 MED26O95402 600 aa17.3■□□□□ 0.36
TRIM41-202ENST00000351937 LGI1O95970 557 aa17.3■□□□□ 0.36
TRIM41-202ENST00000351937 GIMD1P0DJR0 217 aa17.3■□□□□ 0.36
TRIM41-202ENST00000351937 CYP4B1P13584 511 aa17.3■□□□□ 0.36
TRIM41-202ENST00000351937 CHRNEQ04844 493 aa17.3■□□□□ 0.36
TRIM41-202ENST00000351937 RAPSNQ13702 412 aa17.3■□□□□ 0.36
TRIM41-202ENST00000351937 INAVAQ3KP66 663 aa17.3■□□□□ 0.36
TRIM41-202ENST00000351937 C11orf74Q86VG3 221 aa17.3■□□□□ 0.36
TRIM41-202ENST00000351937 VANGL1Q8TAA9 524 aaPredicted RBP17.3■□□□□ 0.36
TRIM41-202ENST00000351937 ALPK1Q96QP1 1244 aa17.3■□□□□ 0.36
TRIM41-202ENST00000351937 APOL4Q9BPW4 351 aa17.3■□□□□ 0.36
TRIM41-202ENST00000351937 NMNAT1Q9HAN9 279 aaPredicted RBP17.3■□□□□ 0.36
TRIM41-202ENST00000351937 CHCHD3Q9NX63 227 aaKnown RBP17.3■□□□□ 0.36
TRIM41-202ENST00000351937 ACAD8Q9UKU7 415 aa17.3■□□□□ 0.36
TRIM41-202ENST00000351937 MRPS33Q9Y291 106 aaKnown RBP17.3■□□□□ 0.36
TRIM41-202ENST00000351937 POFUT2Q9Y2G5 429 aa17.3■□□□□ 0.36
TRIM41-202ENST00000351937 GMPPBQ9Y5P6 360 aa17.3■□□□□ 0.36
TRIM41-202ENST00000351937 THADAQ6YHU6 1953 aa17.3■□□□□ 0.36
TRIM41-202ENST00000351937 FITM1A5D6W6 292 aa17.29■□□□□ 0.36
TRIM41-202ENST00000351937 E9PQ18 207 aa17.29■□□□□ 0.36
TRIM41-202ENST00000351937 PDGFBP01127 241 aaPredicted RBP17.29■□□□□ 0.36
TRIM41-202ENST00000351937 TDGF1P13385 188 aa17.29■□□□□ 0.36
TRIM41-202ENST00000351937 HPCAP84074 193 aa17.29■□□□□ 0.36
TRIM41-202ENST00000351937 TOP3AQ13472 1001 aaPredicted RBP17.29■□□□□ 0.36
TRIM41-202ENST00000351937 SHBQ15464 509 aa17.29■□□□□ 0.36
TRIM41-202ENST00000351937 MEP1AQ16819 746 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms