RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 M0R3H8 397 aa15.68■□□□□ 0.1
SAMM50-201ENST00000350028 OR10H3O60404 316 aa15.68■□□□□ 0.1
SAMM50-201ENST00000350028 FADS2O95864 444 aaKnown RBP15.68■□□□□ 0.1
SAMM50-201ENST00000350028 ALPPP05187 535 aa15.68■□□□□ 0.1
SAMM50-201ENST00000350028 CTSKP43235 329 aa15.68■□□□□ 0.1
SAMM50-201ENST00000350028 LSSP48449 732 aa15.68■□□□□ 0.1
SAMM50-201ENST00000350028 SEC23BQ15437 767 aa15.68■□□□□ 0.1
SAMM50-201ENST00000350028 LTB4RQ15722 352 aa15.68■□□□□ 0.1
SAMM50-201ENST00000350028 ZNF542PQ5EBM4 170 aa15.68■□□□□ 0.1
SAMM50-201ENST00000350028 UBE2UQ5VVX9 321 aa15.68■□□□□ 0.1
SAMM50-201ENST00000350028 OOSP2Q86WS3 158 aa15.68■□□□□ 0.1
SAMM50-201ENST00000350028 CCDC103Q8IW40 242 aa15.68■□□□□ 0.1
SAMM50-201ENST00000350028 ADAMTS15Q8TE58 950 aa15.68■□□□□ 0.1
SAMM50-201ENST00000350028 GGHQ92820 318 aa15.68■□□□□ 0.1
SAMM50-201ENST00000350028 MS4A4EQ96PG1 132 aa15.68■□□□□ 0.1
SAMM50-201ENST00000350028 WFDC6Q9BQY6 131 aa15.68■□□□□ 0.1
SAMM50-201ENST00000350028 RHNO1Q9BSD3 238 aa15.68■□□□□ 0.1
SAMM50-201ENST00000350028 KLHL25Q9H0H3 589 aa15.68■□□□□ 0.1
SAMM50-201ENST00000350028 SLC38A1Q9H2H9 487 aa15.68■□□□□ 0.1
SAMM50-201ENST00000350028 EVA1BQ9NVM1 165 aa15.68■□□□□ 0.1
SAMM50-201ENST00000350028 REV1Q9UBZ9 1251 aa15.68■□□□□ 0.1
SAMM50-201ENST00000350028 SH3D21A4FU49 640 aa15.67■□□□□ 0.1
SAMM50-201ENST00000350028 TMX2-CTNND1H3BSU7 103 aa15.67■□□□□ 0.1
SAMM50-201ENST00000350028 ZNF217O75362 1048 aa15.67■□□□□ 0.1
SAMM50-201ENST00000350028 BCAS1O75363 584 aaPredicted RBP15.67■□□□□ 0.1
SAMM50-201ENST00000350028 GABARAPO95166 117 aa15.67■□□□□ 0.1
SAMM50-201ENST00000350028 EPPINO95925 133 aa15.67■□□□□ 0.1
SAMM50-201ENST00000350028 CDK1P06493 297 aa15.67■□□□□ 0.1
SAMM50-201ENST00000350028 PVRP15151 417 aa15.67■□□□□ 0.1
SAMM50-201ENST00000350028 FOSL2P15408 326 aa15.67■□□□□ 0.1
SAMM50-201ENST00000350028 SNRPNP63162 240 aaKnown RBP15.67■□□□□ 0.1
SAMM50-201ENST00000350028 FOXD4Q12950 439 aaPredicted RBP15.67■□□□□ 0.1
SAMM50-201ENST00000350028 PIN1Q13526 163 aaPredicted RBP15.67■□□□□ 0.1
SAMM50-201ENST00000350028 TDGQ13569 410 aa15.67■□□□□ 0.1
SAMM50-201ENST00000350028 ARMC6Q6NXE6 501 aa15.67■□□□□ 0.1
SAMM50-201ENST00000350028 CDC73Q6P1J9 531 aa15.67■□□□□ 0.1
SAMM50-201ENST00000350028 PGBD2Q6P3X8 592 aa15.67■□□□□ 0.1
SAMM50-201ENST00000350028 OLIG3Q7RTU3 272 aa15.67■□□□□ 0.1
SAMM50-201ENST00000350028 C16orf62Q7Z3J2 963 aa15.67■□□□□ 0.1
SAMM50-201ENST00000350028 COMTD1Q86VU5 262 aa15.67■□□□□ 0.1
SAMM50-201ENST00000350028 TSTD1Q8NFU3 115 aa15.67■□□□□ 0.1
SAMM50-201ENST00000350028 PRRC1Q96M27 445 aa15.67■□□□□ 0.1
SAMM50-201ENST00000350028 UBE2ZQ9H832 354 aaPredicted RBP15.67■□□□□ 0.1
SAMM50-201ENST00000350028 PLGRKTQ9HBL7 147 aa15.67■□□□□ 0.1
SAMM50-201ENST00000350028 EQTNQ9NQ60 294 aa15.67■□□□□ 0.1
SAMM50-201ENST00000350028 PTGFRNQ9P2B2 879 aa15.67■□□□□ 0.1
SAMM50-201ENST00000350028 SCN3AQ9NY46 2000 aa15.66■□□□□ 0.1
SAMM50-201ENST00000350028 NINQ8N4C6 2090 aa15.66■□□□□ 0.1
SAMM50-201ENST00000350028 OR5K3A6NET4 321 aa15.66■□□□□ 0.1
SAMM50-201ENST00000350028 CELA2BP08218 269 aaPredicted RBP15.66■□□□□ 0.1
SAMM50-201ENST00000350028 PORP16435 677 aaPredicted RBP15.66■□□□□ 0.1
SAMM50-201ENST00000350028 ZNF182P17025 639 aaPredicted RBP15.66■□□□□ 0.1
SAMM50-201ENST00000350028 CALRP27797 417 aaKnown RBP15.66■□□□□ 0.1
SAMM50-201ENST00000350028 PSMB9P28065 219 aa15.66■□□□□ 0.1
SAMM50-201ENST00000350028 SIM1P81133 766 aaPredicted RBP15.66■□□□□ 0.1
SAMM50-201ENST00000350028 COX10Q12887 443 aa15.66■□□□□ 0.1
SAMM50-201ENST00000350028 NDUFA9Q16795 377 aa15.66■□□□□ 0.1
SAMM50-201ENST00000350028 FAM214AQ32MH5 1076 aa15.66■□□□□ 0.1
SAMM50-201ENST00000350028 ZNF311Q5JNZ3 666 aa15.66■□□□□ 0.1
SAMM50-201ENST00000350028 C6orf132Q5T0Z8 1188 aa15.66■□□□□ 0.1
SAMM50-201ENST00000350028 HEPHL1Q6MZM0 1159 aa15.66■□□□□ 0.1
SAMM50-201ENST00000350028 MFSD12Q6NUT3 480 aa15.66■□□□□ 0.1
SAMM50-201ENST00000350028 PARGQ86W56 976 aa15.66■□□□□ 0.1
SAMM50-201ENST00000350028 FAM46DQ8NEK8 389 aa15.66■□□□□ 0.1
SAMM50-201ENST00000350028 OR7G2Q8NG99 324 aa15.66■□□□□ 0.1
SAMM50-201ENST00000350028 OR6T1Q8NGN1 323 aa15.66■□□□□ 0.1
SAMM50-201ENST00000350028 TBC1D15Q8TC07 691 aa15.66■□□□□ 0.1
SAMM50-201ENST00000350028 SLC35A4Q96G79 324 aa15.66■□□□□ 0.1
SAMM50-201ENST00000350028 LMAN1LQ9HAT1 526 aa15.66■□□□□ 0.1
SAMM50-201ENST00000350028 CLN6Q9NWW5 311 aa15.66■□□□□ 0.1
SAMM50-201ENST00000350028 SLC13A4Q9UKG4 626 aa15.66■□□□□ 0.1
SAMM50-201ENST00000350028 GOLGA4Q13439 2230 aaKnown RBP15.66■□□□□ 0.1
SAMM50-201ENST00000350028 FAM227AF5H4B4 570 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 EIF2S1P05198 315 aaKnown RBP15.65■□□□□ 0.1
SAMM50-201ENST00000350028 CPMP14384 443 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 POU1F1P28069 291 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 CNR2P34972 360 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 STT3AP46977 705 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 HPCAP84074 193 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 ALDH6A1Q02252 535 aaKnown RBP15.65■□□□□ 0.1
SAMM50-201ENST00000350028 HHEXQ03014 270 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 CHRNEQ04844 493 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 TBCEQ15813 527 aaPredicted RBP15.65■□□□□ 0.1
SAMM50-201ENST00000350028 CTF1Q16619 201 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 SLX4IPQ5VYV7 408 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 PODNL1Q6PEZ8 512 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 CD300LDQ6UXZ3 194 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 PTCHD4Q6ZW05 846 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 CROCCP3Q8IVE0 287 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 OR2L13Q8N349 312 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 FRMD1Q8N878 549 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 SLC7A13Q8TCU3 470 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 ZDHHC1Q8WTX9 485 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 COL26A1Q96A83 441 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 ARHGDIGQ99819 225 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 ORAI3Q9BRQ5 295 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 POLR2J3Q9H1A7 115 aaKnown RBP15.65■□□□□ 0.1
SAMM50-201ENST00000350028 NECTIN3Q9NQS3 549 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 NDOR1Q9UHB4 597 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 VCANP13611 3396 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms