RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 IL36AQ9UHA7 158 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 SCP2D1Q9UJQ7 156 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 CCDC163A0A0D9SF12 145 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 HPGDSO60760 199 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 CRHBPP24387 322 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 TIA1P31483 386 aaKnown RBP eCLIP8.28□□□□□ -1.08
RTN3-202ENST00000339997 PSMB10P40306 273 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 RASGEF1BQ0VAM2 473 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 SLAMF1Q13291 335 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 METTL4Q8N3J2 472 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 PAPD5Q8NDF8 572 aaKnown RBP8.28□□□□□ -1.08
RTN3-202ENST00000339997 RHEBL1Q8TAI7 183 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 BRI3BPQ8WY22 251 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 TCEAL3Q969E4 200 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 ZMYND19Q96E35 227 aaPredicted RBP8.28□□□□□ -1.08
RTN3-202ENST00000339997 WDR77Q9BQA1 342 aaPredicted RBP8.28□□□□□ -1.08
RTN3-202ENST00000339997 OLAHQ9NV23 265 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 ABCD2Q9UBJ2 740 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 STUB1Q9UNE7 303 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 RPH3AQ9Y2J0 694 aaPredicted RBP8.28□□□□□ -1.08
RTN3-202ENST00000339997 AHCTF1Q8WYP5 2266 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 TRAV18A0A075B6X5 111 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 DCDC2BA2VCK2 349 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 RNF13O43567 381 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 BMP4P12644 408 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 CBR1P16152 277 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 GIFP27352 417 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 TGFBR1P36897 503 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 NDUFA9Q16795 377 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 TATDN3Q17R31 274 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 CARD17Q5XLA6 110 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 FAM205BPQ63HN1 556 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 TRNP1Q6NT89 227 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 GRASPQ7Z6J2 395 aaPredicted RBP8.28□□□□□ -1.08
RTN3-202ENST00000339997 COMTD1Q86VU5 262 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 ZNF611Q8N823 705 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 OSTF1Q92882 214 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 SAP130Q9H0E3 1048 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 FBXL12Q9NXK8 326 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 COPS7AQ9UBW8 275 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 ENPP5Q9UJA9 477 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 ZNF225Q9UK10 706 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 SCML2Q9UQR0 700 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 ARFGEF2Q9Y6D5 1785 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 AGAP5A6NIR3 686 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 ZNF670-ZNF695F2Z2N8 137 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 NUAK1O60285 661 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 CREBL2O60519 120 aaPredicted RBP8.28□□□□□ -1.08
RTN3-202ENST00000339997 GNRH1P01148 92 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 GNSP15586 552 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 PTPN2P17706 415 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 IL1RNP18510 177 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 STEAP4Q687X5 459 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 ANKRD34AQ69YU3 496 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 ALKAL2Q6UX46 152 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 OLIG3Q7RTU3 272 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 MAVSQ7Z434 540 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 OVCA2Q8WZ82 227 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 GTF2H4Q92759 462 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 IL21RQ9HBE5 538 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 RDH14Q9HBH5 336 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 ASF1BQ9NVP2 202 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 ERVW-1Q9UQF0 538 aa8.28□□□□□ -1.08
RTN3-202ENST00000339997 HCRTR2O43614 444 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 UBXN7O94888 489 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 FDXRP22570 491 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 TACR1P25103 407 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 SCNN1AP37088 669 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 GRIA2P42262 883 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 ATP4BP51164 291 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 CLDN8P56748 225 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 CEP68Q76N32 757 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 ESX1Q8N693 406 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 NUP43Q8NFH3 380 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 SAMD8Q96LT4 415 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 RNF167Q9H6Y7 350 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 FZD3Q9NPG1 666 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 KCNN3Q9UGI6 736 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 CD300AQ9UGN4 299 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 MEMO1Q9Y316 297 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 AKAP6Q13023 2319 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 ZNF726A6NNF4 738 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 F8W036 122 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 TXNL1O43396 289 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 SCO2O43819 266 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 KNG1P01042 644 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 NPPAP01160 153 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 TFP02787 698 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 THEGLP0DJG4 465 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 EPCAMP16422 314 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 AHRP35869 848 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 PRKXP51817 358 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 BLOC1S1P78537 153 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 CACNA1DQ01668 2161 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 SNTA1Q13424 505 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 BATFQ16520 125 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 PNCKQ6P2M8 343 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 COMMD6Q7Z4G1 85 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 OR6N1Q8NGY5 312 aa8.27□□□□□ -1.09
RTN3-202ENST00000339997 OR56A3Q8NH54 315 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms