RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 RASSF5Q8WWW0 418 aa14.46□□□□□ -0.1
LIMS1-202ENST00000338045 SLC35A4Q96G79 324 aa14.46□□□□□ -0.1
LIMS1-202ENST00000338045 TRNT1Q96Q11 434 aaKnown RBP14.46□□□□□ -0.1
LIMS1-202ENST00000338045 OR1F2PQ96R84 312 aa14.46□□□□□ -0.1
LIMS1-202ENST00000338045 NDC1Q9BTX1 674 aa14.46□□□□□ -0.1
LIMS1-202ENST00000338045 CXorf21Q9HAI6 301 aa14.46□□□□□ -0.1
LIMS1-202ENST00000338045 USE1Q9NZ43 259 aa14.46□□□□□ -0.1
LIMS1-202ENST00000338045 PCDHGB2Q9Y5G2 931 aa14.46□□□□□ -0.1
LIMS1-202ENST00000338045 MAGED1Q9Y5V3 778 aaPredicted RBP14.46□□□□□ -0.1
LIMS1-202ENST00000338045 DSPPQ9NZW4 1301 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 A0A0G2JPF8 293 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 HNRNPCL2B2RXH8 293 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 HNRNPCL3B7ZW38 293 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 DSCR3O14972 297 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 KHNYNO15037 678 aaKnown RBP14.45□□□□□ -0.1
LIMS1-202ENST00000338045 HYAL3O43820 417 aaPredicted RBP14.45□□□□□ -0.1
LIMS1-202ENST00000338045 OR10H2O60403 315 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 SERPINB7O75635 380 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 DIRAS1O95057 198 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 HNRNPCL4P0DMR1 293 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 TNFRSF1BP20333 461 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 MAP3K8P41279 467 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 KCNJ5P48544 419 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 DAB2P98082 770 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 PPP2R2BQ00005 443 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 DSG2Q14126 1118 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 ERV3-1Q14264 604 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 OTUD3Q5T2D3 398 aaPredicted RBP14.45□□□□□ -0.1
LIMS1-202ENST00000338045 PRAMEF17Q5VTA0 474 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 ZC3H14Q6PJT7 736 aaKnown RBP14.45□□□□□ -0.1
LIMS1-202ENST00000338045 KRT73Q86Y46 540 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 HIPK1Q86Z02 1210 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 KMT2EQ8IZD2 1858 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 VWA5B2Q8N398 1253 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 MAGEE2Q8TD90 523 aaPredicted RBP14.45□□□□□ -0.1
LIMS1-202ENST00000338045 ADAMTS15Q8TE58 950 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 TFAP2CQ92754 450 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 HOXB13Q92826 284 aaPredicted RBP14.45□□□□□ -0.1
LIMS1-202ENST00000338045 GATA6Q92908 595 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 NRBF2Q96F24 287 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 COL21A1Q96P44 957 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 ZNF347Q96SE7 839 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 OSBPL10Q9BXB5 764 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 SLC38A1Q9H2H9 487 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 LANCL2Q9NS86 450 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 CALML5Q9NZT1 146 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 DHCR7Q9UBM7 475 aaKnown RBP14.45□□□□□ -0.1
LIMS1-202ENST00000338045 MAU2Q9Y6X3 613 aa14.45□□□□□ -0.1
LIMS1-202ENST00000338045 NME6O75414 186 aaPredicted RBP14.44□□□□□ -0.1
LIMS1-202ENST00000338045 E2F6O75461 281 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 CDC123O75794 336 aaPredicted RBP14.44□□□□□ -0.1
LIMS1-202ENST00000338045 CBX7O95931 251 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 FESP07332 822 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 ACP2P11117 423 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 S1PR1P21453 382 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 ALAS2P22557 587 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 DNAJA1P31689 397 aaKnown RBP14.44□□□□□ -0.1
LIMS1-202ENST00000338045 OR1D4P47884 311 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 BTG2P78543 158 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 KCNC4Q03721 635 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 STX4Q12846 297 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 BIKQ13323 160 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 PUM1Q14671 1186 aaKnown RBP eCLIP14.44□□□□□ -0.1
LIMS1-202ENST00000338045 ATAD3BQ5T9A4 648 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 TCEAL6Q6IPX3 200 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 CHERPQ8IWX8 916 aaKnown RBP14.44□□□□□ -0.1
LIMS1-202ENST00000338045 HS3ST5Q8IZT8 346 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 CDRT4Q8N9R6 151 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 TCEAL3Q969E4 200 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 SDCCAG3Q96C92 435 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 ZNF300Q96RE9 604 aaPredicted RBP14.44□□□□□ -0.1
LIMS1-202ENST00000338045 ALOXE3Q9BYJ1 711 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 GABARAPL1Q9H0R8 117 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 PIGUQ9H490 435 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 EXD2Q9NVH0 621 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 SMPD3Q9NY59 655 aaPredicted RBP14.44□□□□□ -0.1
LIMS1-202ENST00000338045 IFT80Q9P2H3 777 aaPredicted RBP14.44□□□□□ -0.1
LIMS1-202ENST00000338045 A0A1B0GX78 115 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 NTN3O00634 580 aaPredicted RBP14.44□□□□□ -0.1
LIMS1-202ENST00000338045 H6PDO95479 791 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 ITGA2P17301 1181 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 FPR1P21462 350 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 GALNSP34059 522 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 STT3AP46977 705 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 OR1E2P47887 323 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 PPP1R8Q12972 351 aaKnown RBP14.44□□□□□ -0.1
LIMS1-202ENST00000338045 SERTAD2Q14140 314 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 DUSP5Q16690 384 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 GPAT3Q53EU6 434 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 WDR53Q7Z5U6 358 aaPredicted RBP14.44□□□□□ -0.1
LIMS1-202ENST00000338045 SLITRK4Q8IW52 837 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 GALNT12Q8IXK2 581 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.44□□□□□ -0.1
LIMS1-202ENST00000338045 RBM18Q96H35 190 aaKnown RBP14.44□□□□□ -0.1
LIMS1-202ENST00000338045 CCDC74BQ96LY2 380 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 RDH12Q96NR8 316 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 STACQ99469 402 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 RBM4BQ9BQ04 359 aaKnown RBP14.44□□□□□ -0.1
LIMS1-202ENST00000338045 SLX1AQ9BQ83 275 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 SPATA5L1Q9BVQ7 753 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms