RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CCDC190Q86UF4 302 aa15.62■□□□□ 0.09
CDC42EP4-201ENST00000335793 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.62■□□□□ 0.09
CDC42EP4-201ENST00000335793 GATAD2BQ8WXI9 593 aa15.62■□□□□ 0.09
CDC42EP4-201ENST00000335793 TRMT61AQ96FX7 289 aaKnown RBP15.62■□□□□ 0.09
CDC42EP4-201ENST00000335793 MACROD1Q9BQ69 325 aa15.62■□□□□ 0.09
CDC42EP4-201ENST00000335793 PRR14Q9BWN1 585 aa15.62■□□□□ 0.09
CDC42EP4-201ENST00000335793 SLAMF7Q9NQ25 335 aa15.62■□□□□ 0.09
CDC42EP4-201ENST00000335793 A0A1W2PQ09 198 aa15.62■□□□□ 0.09
CDC42EP4-201ENST00000335793 SCAMP1O15126 338 aa15.62■□□□□ 0.09
CDC42EP4-201ENST00000335793 CAV3P56539 151 aa15.62■□□□□ 0.09
CDC42EP4-201ENST00000335793 OR2G6Q5TZ20 316 aa15.62■□□□□ 0.09
CDC42EP4-201ENST00000335793 WDR53Q7Z5U6 358 aaPredicted RBP15.62■□□□□ 0.09
CDC42EP4-201ENST00000335793 GLCCI1Q86VQ1 547 aa15.62■□□□□ 0.09
CDC42EP4-201ENST00000335793 TMEM151BQ8IW70 566 aa15.62■□□□□ 0.09
CDC42EP4-201ENST00000335793 SMPDL3AQ92484 453 aa15.62■□□□□ 0.09
CDC42EP4-201ENST00000335793 SLC7A6Q92536 515 aa15.62■□□□□ 0.09
CDC42EP4-201ENST00000335793 MVB12BQ9H7P6 319 aa15.62■□□□□ 0.09
CDC42EP4-201ENST00000335793 YARS2Q9Y2Z4 477 aaKnown RBP15.62■□□□□ 0.09
CDC42EP4-201ENST00000335793 A0A1W2PQL4 384 aaPredicted RBP15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 TOR1AO14656 332 aa15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 KELP23276 732 aa15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 SMSP52788 366 aa15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 LSM11P83369 360 aaKnown RBP eCLIP15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 UNC5DQ6UXZ4 953 aa15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 ATCAYQ86WG3 371 aa15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 LAS2Q8IYD9 372 aa15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 LHFPL5Q8TAF8 219 aa15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 SLC22A8Q8TCC7 542 aa15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 OR5P2Q8WZ92 322 aa15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 ZBED6CLQ96FA7 236 aaPredicted RBP15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 GON7Q9BXV9 100 aa15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 STUB1Q9UNE7 303 aa15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 SLC9A8Q9Y2E8 581 aa15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 LRRTM2O43300 516 aa15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 C8orf89P0DMQ9 161 aa15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 PCBP3P57721 371 aaKnown RBP15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 GPR32P1Q8NGA4 272 aa15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 OR4K5Q8NGD3 323 aa15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 ENKURQ8TC29 256 aa15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 DTD2Q96FN9 168 aa15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 PDXPQ96GD0 296 aa15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 RADILQ96JH8 1075 aa15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 TREX2Q9BQ50 279 aaPredicted RBP15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 WFDC6Q9BQY6 131 aa15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 CCDC32Q9BV29 185 aa15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 RACGAP1Q9H0H5 632 aa15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 CMAHPQ9Y471 501 aa15.61■□□□□ 0.09
CDC42EP4-201ENST00000335793 TEX46H3BTG2 121 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 EFEMP2O95967 443 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 C6P13671 934 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 ALAS2P22557 587 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 PPM1AP35813 382 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 HMGA2P52926 109 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 SMIM11AP58511 58 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 LASP1Q14847 261 aaKnown RBP15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 KHDRBS2Q5VWX1 349 aaKnown RBP15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 AMZ2Q86W34 360 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 UCN3Q969E3 161 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 MTERF3Q96E29 417 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 LMLNQ96KR4 655 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 SLC35G5Q96KT7 338 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 RIPOR3Q96MK2 946 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 SMAD5Q99717 465 aaKnown RBP15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 OR51I1Q9H343 314 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 WASH3PC4AMC7 463 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 H3BQ06 376 aaPredicted RBP15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 FAAHO00519 579 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 CASKO14936 926 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 PPM1DO15297 605 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 FRS3O43559 492 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 RHOP08100 348 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 EEF1A2Q05639 463 aaKnown RBP15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 ILKQ13418 452 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 DOC2BQ14184 412 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 PODNL1Q6PEZ8 512 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 LHFPL3Q86UP9 236 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 TRMT61BQ9BVS5 477 aaKnown RBP15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 BARHL1Q9BZE3 327 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 MS4A7Q9GZW8 240 aaPredicted RBP15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 QRSL1Q9H0R6 528 aaKnown RBP15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 PPIL3Q9H2H8 161 aaKnown RBP15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 TBC1D17Q9HA65 648 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 TEX10Q9NXF1 929 aaPredicted RBP15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 TBC1D24Q9ULP9 559 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 CAPN5O15484 640 aaPredicted RBP15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 PRKYO43930 277 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 PRKRAO75569 313 aaKnown RBP15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 CXCL10P02778 98 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 HBQ1P09105 142 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 CSF2RAP15509 400 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 SDC2P34741 201 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 IRS1P35568 1242 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 GPR50Q13585 617 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 PDE7AQ13946 482 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 NELL2Q99435 816 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 SGPP1Q9BX95 441 aa15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 NXF2Q9GZY0 626 aaKnown RBP15.6■□□□□ 0.09
CDC42EP4-201ENST00000335793 OR5K3A6NET4 321 aa15.59■□□□□ 0.09
CDC42EP4-201ENST00000335793 ZNF254O75437 659 aa15.59■□□□□ 0.09
CDC42EP4-201ENST00000335793 PCCBP05166 539 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms