RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 FOPNLQ96NB1 174 aa13.64□□□□□ -0.23
SNX20-202ENST00000330943 RNF32Q9H0A6 362 aa13.64□□□□□ -0.23
SNX20-202ENST00000330943 FOLH1BQ9HBA9 442 aa13.64□□□□□ -0.23
SNX20-202ENST00000330943 ISYNA1Q9NPH2 558 aa13.64□□□□□ -0.23
SNX20-202ENST00000330943 C5AR2Q9P296 337 aa13.64□□□□□ -0.23
SNX20-202ENST00000330943 ADAM30Q9UKF2 790 aa13.64□□□□□ -0.23
SNX20-202ENST00000330943 NUP50Q9UKX7 468 aa13.64□□□□□ -0.23
SNX20-202ENST00000330943 PLXND1Q9Y4D7 1925 aa13.64□□□□□ -0.23
SNX20-202ENST00000330943 CKAP5Q14008 2032 aa13.64□□□□□ -0.23
SNX20-202ENST00000330943 TRAV6A0A075B6T7 132 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 CDK2AP1O14519 115 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 LANCL1O43813 399 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 LATS1O95835 1130 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 C1GALT1C1LP0DN25 315 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 PTBP1P26599 531 aaKnown RBP eCLIP13.63□□□□□ -0.23
SNX20-202ENST00000330943 ETV3P41162 512 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 ATP12AP54707 1039 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 CDK5Q00535 292 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 COX10Q12887 443 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 RIN1Q13671 783 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 DUSP6Q16828 381 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 HIST2H2AA3Q6FI13 130 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 KLHDC8AQ8IYD2 350 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 FBXL6Q8N531 539 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 FGF11Q92914 225 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 UCN3Q969E3 161 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 EFCAB11Q9BUY7 163 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 ABCG4Q9H172 646 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 ACAD8Q9UKU7 415 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 YIPF1Q9Y548 306 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 GOLGA4Q13439 2230 aaKnown RBP13.63□□□□□ -0.23
SNX20-202ENST00000330943 TEX51A0A1B0GUA7 166 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 LINC00862A6NCI5 91 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 HMGN4O00479 90 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 SLC6A1P30531 599 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 SLC1A3P43003 542 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 SLC6A11P48066 632 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 TCTN1Q2MV58 587 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 Q6ZNB5 142 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 C6orf120Q7Z4R8 191 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 KIF18BQ86Y91 864 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 GHDCQ8N2G8 530 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 ARIH2OSQ8N7S6 290 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 CHST14Q8NCH0 376 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 PCNPQ8WW12 178 aaKnown RBP13.63□□□□□ -0.23
SNX20-202ENST00000330943 ZNF607Q96SK3 696 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 RIOK2Q9BVS4 552 aaKnown RBP13.63□□□□□ -0.23
SNX20-202ENST00000330943 PHF11Q9UIL8 331 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 TRIOO75962 3097 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 CIB4A0PJX0 185 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 SNTNA6NMZ2 147 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 DVL2O14641 736 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 PDPK1O15530 556 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 PQBP1O60828 265 aaKnown RBP13.63□□□□□ -0.23
SNX20-202ENST00000330943 OR7A10O76100 309 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 HLA-DPB1P04440 258 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 ENPP1P22413 925 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 POU6F2P78424 691 aaPredicted RBP13.63□□□□□ -0.23
SNX20-202ENST00000330943 EFNB1P98172 346 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 RGS1Q08116 209 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 SYPL1Q16563 259 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 ZNF791Q3KP31 576 aaPredicted RBP13.63□□□□□ -0.23
SNX20-202ENST00000330943 MINDY4Q4G0A6 757 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 PXDC1Q5TGL8 231 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 TECPR1Q7Z6L1 1165 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 RASGEF1AQ8N9B8 481 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 OR4F15Q8NGB8 312 aa13.63□□□□□ -0.23
SNX20-202ENST00000330943 MRPS31Q92665 395 aaKnown RBP13.63□□□□□ -0.23
SNX20-202ENST00000330943 A0A1W2PRQ8 180 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 IRGMA1A4Y4 181 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 B4GALT2O60909 372 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 RAB8AP61006 207 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 SP3Q02447 781 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 TLE2Q04725 743 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 MAP4K2Q12851 820 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 CNTN1Q12860 1018 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 POU4F3Q15319 338 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 NDUFA9Q16795 377 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 CLEC12AQ5QGZ9 265 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 IDNKQ5T6J7 187 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 TMEM150AQ86TG1 271 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 METTL3Q86U44 580 aaKnown RBP13.62□□□□□ -0.23
SNX20-202ENST00000330943 OR11H7Q8NGC8 314 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 TEX47Q8TBZ9 253 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 MARVELD3Q96A59 401 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 TREX2Q9BQ50 279 aaPredicted RBP13.62□□□□□ -0.23
SNX20-202ENST00000330943 SAP130Q9H0E3 1048 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 ABCG5Q9H222 651 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 ZFP64Q9NPA5 681 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 STARD7Q9NQZ5 370 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 MRPS18AQ9NVS2 196 aaKnown RBP13.62□□□□□ -0.23
SNX20-202ENST00000330943 UCKL1Q9NWZ5 548 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 ICKQ9UPZ9 632 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 CASP8AP2Q9UKL3 1982 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 A0A1B0GVC2 190 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 A6NIN4 97 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 RTCAO00442 366 aaKnown RBP13.62□□□□□ -0.23
SNX20-202ENST00000330943 SLC19A2O60779 497 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 ATG13O75143 517 aa13.62□□□□□ -0.23
SNX20-202ENST00000330943 ZNF250P15622 560 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms