RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 PLEKHA8Q96JA3 519 aa19.02■□□□□ 0.64
RIPPLY3-201ENST00000329553 RSPO3Q9BXY4 272 aaPredicted RBP19.02■□□□□ 0.64
RIPPLY3-201ENST00000329553 GABARAPL1Q9H0R8 117 aa19.02■□□□□ 0.64
RIPPLY3-201ENST00000329553 SOHLH2Q9NX45 425 aa19.02■□□□□ 0.64
RIPPLY3-201ENST00000329553 THUMPD1Q9NXG2 353 aaKnown RBP19.02■□□□□ 0.64
RIPPLY3-201ENST00000329553 P2RX2Q9UBL9 471 aa19.02■□□□□ 0.64
RIPPLY3-201ENST00000329553 PLCL2Q9UPR0 1127 aa19.02■□□□□ 0.64
RIPPLY3-201ENST00000329553 CCDC88CQ9P219 2028 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 HRO43593 1189 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 SLC28A2O43868 658 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 FGF17O60258 216 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 NME6O75414 186 aaPredicted RBP19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 CCDC159P0C7I6 412 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 CPMP14384 443 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 GLB1P16278 677 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 ITIH1P19827 911 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 MLLT3P42568 568 aaPredicted RBP19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 ITGA1P56199 1179 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 RAB15P59190 212 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 CFHR1Q03591 330 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 LAPTM4AQ15012 233 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 C1orf210Q8IVY1 113 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 OR7G2Q8NG99 324 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 ZNF285Q96NJ3 590 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 PDE7BQ9NP56 450 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 PALMDQ9NP74 551 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 FSCN3Q9NQT6 498 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 PAK1IP1Q9NWT1 392 aaPredicted RBP19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 NDUFAF4Q9P032 175 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 ASXL3Q9C0F0 2248 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 A0A0A6YYC8 382 aaPredicted RBP19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 I3L1I5 382 aaPredicted RBP19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 FOXS1O43638 330 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 PORP16435 677 aaPredicted RBP19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 KHKP50053 298 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 PIGFQ07326 219 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 ARMC8Q8IUR7 673 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 GIPC3Q8TF64 312 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 FUNDC2Q9BWH2 189 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 CLCA2Q9UQC9 943 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 ORC6Q9Y5N6 252 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 KCNE3Q9Y6H6 103 aa19.01■□□□□ 0.63
RIPPLY3-201ENST00000329553 TNRC6BQ9UPQ9 1833 aaKnown RBP19■□□□□ 0.63
RIPPLY3-201ENST00000329553 GIMAP1-GIMAP5A0A087WTJ2 511 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 CHST10O43529 356 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 MFN2O95140 757 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 NR2F1P10589 423 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 SOX18P35713 384 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 MAGEA8P43361 318 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 RAB38P57729 211 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 CDK5R2Q13319 367 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 AMZ1Q400G9 498 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 SLC16A12Q6ZSM3 486 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 OLIG3Q7RTU3 272 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 ZNF554Q86TJ5 538 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 GATAD2AQ86YP4 633 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 Q8N9G6 341 aaPredicted RBP19■□□□□ 0.63
RIPPLY3-201ENST00000329553 GIMAP5Q96F15 307 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 NODALQ96S42 347 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 CD180Q99467 661 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 TREX2Q9BQ50 279 aaPredicted RBP19■□□□□ 0.63
RIPPLY3-201ENST00000329553 RUBCNLQ9H714 662 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 EQTNQ9NQ60 294 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 SH3GLB1Q9Y371 365 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 SAMHD1Q9Y3Z3 626 aaKnown RBP19■□□□□ 0.63
RIPPLY3-201ENST00000329553 PCDHGB1Q9Y5G3 927 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 TMEM247A6NEH6 219 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 BCKDKO14874 412 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 CASC3O15234 703 aaKnown RBP19■□□□□ 0.63
RIPPLY3-201ENST00000329553 CLPXO76031 633 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 ZBTB11O95625 1053 aaPredicted RBP19■□□□□ 0.63
RIPPLY3-201ENST00000329553 GPR75O95800 540 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 ZNF12P17014 697 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 DNAJA1P31689 397 aaKnown RBP19■□□□□ 0.63
RIPPLY3-201ENST00000329553 CYP4Z1Q86W10 505 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 TTC29Q8NA56 475 aaPredicted RBP19■□□□□ 0.63
RIPPLY3-201ENST00000329553 SIMC1Q8NDZ2 872 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 PIK3C3Q8NEB9 887 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 PIGKQ92643 395 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 CHRNA10Q9GZZ6 450 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 NTMQ9P121 344 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 SNX5Q9Y5X3 404 aa19■□□□□ 0.63
RIPPLY3-201ENST00000329553 UNC13CQ8NB66 2214 aa18.99■□□□□ 0.63
RIPPLY3-201ENST00000329553 DPM1O60762 260 aa18.99■□□□□ 0.63
RIPPLY3-201ENST00000329553 RECKO95980 971 aa18.99■□□□□ 0.63
RIPPLY3-201ENST00000329553 FUT5Q11128 374 aa18.99■□□□□ 0.63
RIPPLY3-201ENST00000329553 AQP6Q13520 282 aa18.99■□□□□ 0.63
RIPPLY3-201ENST00000329553 RAPSNQ13702 412 aa18.99■□□□□ 0.63
RIPPLY3-201ENST00000329553 FAM111BQ6SJ93 734 aa18.99■□□□□ 0.63
RIPPLY3-201ENST00000329553 DOK4Q8TEW6 326 aa18.99■□□□□ 0.63
RIPPLY3-201ENST00000329553 TRUB1Q8WWH5 349 aaKnown RBP18.99■□□□□ 0.63
RIPPLY3-201ENST00000329553 OR7D2Q96RA2 312 aa18.99■□□□□ 0.63
RIPPLY3-201ENST00000329553 REEP1Q9H902 201 aa18.99■□□□□ 0.63
RIPPLY3-201ENST00000329553 ENPP5Q9UJA9 477 aa18.99■□□□□ 0.63
RIPPLY3-201ENST00000329553 HYKKA2RU49 373 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 MITFO75030 526 aaPredicted RBP18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 BCAS1O75363 584 aaPredicted RBP18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 FPR1P21462 350 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 IGFBP5P24593 272 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 GPR3P46089 330 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms