RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 MYOGP15173 224 aa13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 RNF144AP50876 292 aaPredicted RBP13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 RPA4Q13156 261 aa13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 TMEM52BQ4KMG9 183 aa13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 DGLUCYQ7Z3D6 616 aa13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 LAPTM4BQ86VI4 370 aa13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 TP53I13Q8NBR0 393 aaPredicted RBP13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 PROKR2Q8NFJ6 384 aa13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 ASB15Q8WXK1 588 aa13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 ZNF707Q96C28 371 aaPredicted RBP13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 DIRAS2Q96HU8 199 aa13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 ZNF582Q96NG8 517 aaPredicted RBP13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 NELL2Q99435 816 aa13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 PCBD2Q9H0N5 130 aa13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 WDR26Q9H7D7 661 aa13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 WASH6PQ9NQA3 447 aa13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 ENTPD4Q9Y227 616 aa13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 NTNG1Q9Y2I2 539 aa13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 HEATR5BQ9P2D3 2071 aa13.24□□□□□ -0.29
ATP2C1-201ENST00000328560 TRBV23OR9-2A0A075B6M9 112 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 LRIT2A6NDA9 550 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 NR2F6P10588 404 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 ATP6V1E1P36543 226 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 LIMK1P53667 647 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 DUSP2Q05923 314 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 DBPQ10586 325 aaPredicted RBP13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 ZNF730Q6ZMV8 503 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 VRK2Q86Y07 508 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 TEX47Q8TBZ9 253 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 FGF13Q92913 245 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 MMP28Q9H239 520 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 MRPS30Q9NP92 439 aaKnown RBP13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 A0A1W2PP55 124 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 H3BQ06 376 aaPredicted RBP13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 RAB36O95755 333 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 CSF2P04141 144 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 CERS1P27544 350 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 SDC2P34741 201 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 BCL6P41182 706 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 SOX9P48436 509 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 KHKP50053 298 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 TAS2R38P59533 333 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 SGCGQ13326 291 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 ARHGAP19Q14CB8 494 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 ZNF311Q5JNZ3 666 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 C19orf48Q6RUI8 117 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 FLCNQ8NFG4 579 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 RNFT2Q96EX2 444 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 FAM46AQ96IP4 442 aaKnown RBP13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 CAMK1GQ96NX5 476 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 NEK6Q9HC98 313 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 ACSS1Q9NUB1 689 aaPredicted RBP13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 TXNL4BQ9NX01 149 aaKnown RBP13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 SERGEFQ9UGK8 458 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 TBC1D24Q9ULP9 559 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 IGKV1-8A0A0C4DH67 115 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 A0A1W2PR48 441 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 FAM170BA6NMN3 283 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 PRDX1Q06830 199 aaKnown RBP13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 MLF2Q15773 248 aaPredicted RBP13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 HDDC3Q8N4P3 179 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 ACOT4Q8N9L9 421 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 IL17RDQ8NFM7 739 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 RAB7BQ96AH8 199 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 COX14Q96I36 57 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 AICDAQ9GZX7 198 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 RMI1Q9H9A7 625 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 FZD3Q9NPG1 666 aa13.23□□□□□ -0.29
ATP2C1-201ENST00000328560 A0A1W2PQ09 198 aa13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 A0A1W2PQL4 384 aaPredicted RBP13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 ZNF670-ZNF695F2Z2N8 137 aa13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 MC3RP41968 323 aa13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 RPS25P62851 125 aaKnown RBP13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 CHRNEQ04844 493 aa13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 LARS2Q15031 903 aaKnown RBP13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 TOR1AIP1Q5JTV8 583 aa13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 NATD1Q8N6N6 113 aa13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 OR2A1Q8NGT9 310 aa13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 CNRIP1Q96F85 164 aaPredicted RBP13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 FCRL4Q96PJ5 515 aa13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 OR2A14Q96R47 310 aa13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 DDX31Q9H8H2 851 aaKnown RBP13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 MAN2C1Q9NTJ4 1040 aa13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 COMMD3Q9UBI1 195 aa13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 CMAHPQ9Y471 501 aa13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 F5P12259 2224 aa13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 SCN3AQ9NY46 2000 aa13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 A0A087WUU8 490 aa13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 A0A1W2PRQ8 180 aa13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 FABP12A6NFH5 140 aa13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 A6NL46 340 aa13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 C4orf51C9J302 202 aa13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 EPPINO95925 133 aa13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 TP53P04637 393 aaPredicted RBP13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 TCEA1P23193 301 aaKnown RBP13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 SMSP52788 366 aa13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 MRPS15P82914 257 aaKnown RBP13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 CAMK1Q14012 370 aa13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 LTB4RQ15722 352 aa13.22□□□□□ -0.29
ATP2C1-201ENST00000328560 PDZK1Q5T2W1 519 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms