RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 ARHGAP11BQ3KRB8 267 aa16.69■□□□□ 0.26
RAB39A-201ENST00000320578 ZNF528Q3MIS6 628 aa16.69■□□□□ 0.26
RAB39A-201ENST00000320578 CYP4Z1Q86W10 505 aa16.69■□□□□ 0.26
RAB39A-201ENST00000320578 CHDHQ8NE62 594 aaPredicted RBP16.69■□□□□ 0.26
RAB39A-201ENST00000320578 GIPC3Q8TF64 312 aa16.69■□□□□ 0.26
RAB39A-201ENST00000320578 CCDC74AQ96AQ1 378 aa16.69■□□□□ 0.26
RAB39A-201ENST00000320578 RMND5BQ96G75 393 aaPredicted RBP16.69■□□□□ 0.26
RAB39A-201ENST00000320578 FBXL20Q96IG2 436 aa16.69■□□□□ 0.26
RAB39A-201ENST00000320578 DHRS1Q96LJ7 313 aa16.69■□□□□ 0.26
RAB39A-201ENST00000320578 ZNF578Q96N58 590 aaPredicted RBP16.69■□□□□ 0.26
RAB39A-201ENST00000320578 MRPS26Q9BYN8 205 aaKnown RBP16.69■□□□□ 0.26
RAB39A-201ENST00000320578 SLC38A1Q9H2H9 487 aa16.69■□□□□ 0.26
RAB39A-201ENST00000320578 ZNF768Q9H5H4 540 aaKnown RBP16.69■□□□□ 0.26
RAB39A-201ENST00000320578 TRIM45Q9H8W5 580 aaPredicted RBP16.69■□□□□ 0.26
RAB39A-201ENST00000320578 ACAD8Q9UKU7 415 aa16.69■□□□□ 0.26
RAB39A-201ENST00000320578 SATB2Q9UPW6 733 aa16.69■□□□□ 0.26
RAB39A-201ENST00000320578 KCNE3Q9Y6H6 103 aa16.69■□□□□ 0.26
RAB39A-201ENST00000320578 DPPA5A6NC42 116 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 EIF4E1BA6NMX2 242 aaKnown RBP16.68■□□□□ 0.26
RAB39A-201ENST00000320578 ZNF749O43361 778 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 COQ9O75208 318 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 UGT2B11O75310 529 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 LGI1O95970 557 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 GUSBP08236 651 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 ANKRD34CP0C6C1 535 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 SMIM18P0DKX4 95 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 ANXA8P13928 327 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 TNFRSF1BP20333 461 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 SMIM11AP58511 58 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 KCNAB2Q13303 367 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 ZIK1Q3SY52 487 aaPredicted RBP16.68■□□□□ 0.26
RAB39A-201ENST00000320578 AMZ1Q400G9 498 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 GPAT3Q53EU6 434 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 TRMT12Q53H54 448 aaKnown RBP16.68■□□□□ 0.26
RAB39A-201ENST00000320578 TMEM71Q6P5X7 295 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 C16orf62Q7Z3J2 963 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 BARD1Q99728 777 aaKnown RBP16.68■□□□□ 0.26
RAB39A-201ENST00000320578 PELOQ9BRX2 385 aaKnown RBP16.68■□□□□ 0.26
RAB39A-201ENST00000320578 RSPO3Q9BXY4 272 aaPredicted RBP16.68■□□□□ 0.26
RAB39A-201ENST00000320578 CUTCQ9NTM9 273 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 ACER3Q9NUN7 267 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 IRAK4Q9NWZ3 460 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 CDC14AQ9UNH5 594 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 TECTAO75443 2155 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 LY6G6EA0A0G2JKS1 128 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 EME2A4GXA9 379 aaPredicted RBP16.68■□□□□ 0.26
RAB39A-201ENST00000320578 PCDHGA12O60330 932 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 OR2B3O76000 313 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 SPIBQ01892 262 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 ID2Q02363 134 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 APOFQ13790 326 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 CLPPQ16740 277 aaPredicted RBP16.68■□□□□ 0.26
RAB39A-201ENST00000320578 MICAQ29983 383 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 DHRS4L2Q6PKH6 230 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 TMEM105Q8N8V8 129 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 Q8N9G6 341 aaPredicted RBP16.68■□□□□ 0.26
RAB39A-201ENST00000320578 SLC16A11Q8NCK7 471 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 NR4A3Q92570 626 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 MMABQ96EY8 250 aaPredicted RBP16.68■□□□□ 0.26
RAB39A-201ENST00000320578 MTHFD2LQ9H903 347 aaPredicted RBP16.68■□□□□ 0.26
RAB39A-201ENST00000320578 EQTNQ9NQ60 294 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 PRTFDC1Q9NRG1 225 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 HCN3Q9P1Z3 774 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 KLHL3Q9UH77 587 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 SLC9A8Q9Y2E8 581 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 TESMINQ9Y4I5 508 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 HSPE1-MOB4S4R3N1 261 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 U3KQA8 63 aa16.68■□□□□ 0.26
RAB39A-201ENST00000320578 LOC100130705A0A1B0GUX0 176 aa16.67■□□□□ 0.26
RAB39A-201ENST00000320578 E9PQ18 207 aa16.67■□□□□ 0.26
RAB39A-201ENST00000320578 ALOX5P09917 674 aa16.67■□□□□ 0.26
RAB39A-201ENST00000320578 PABPC4LP0CB38 370 aaKnown RBP16.67■□□□□ 0.26
RAB39A-201ENST00000320578 PRKAR1BP31321 381 aa16.67■□□□□ 0.26
RAB39A-201ENST00000320578 SERTAD2Q14140 314 aa16.67■□□□□ 0.26
RAB39A-201ENST00000320578 KEAP1Q14145 624 aa16.67■□□□□ 0.26
RAB39A-201ENST00000320578 TCTN3Q6NUS6 607 aa16.67■□□□□ 0.26
RAB39A-201ENST00000320578 TTC33Q6PID6 262 aaPredicted RBP16.67■□□□□ 0.26
RAB39A-201ENST00000320578 THAP5Q7Z6K1 395 aa16.67■□□□□ 0.26
RAB39A-201ENST00000320578 C8orf59Q8N0T1 100 aaPredicted RBP16.67■□□□□ 0.26
RAB39A-201ENST00000320578 NAT6Q93015 286 aa16.67■□□□□ 0.26
RAB39A-201ENST00000320578 PEX11GQ96HA9 241 aa16.67■□□□□ 0.26
RAB39A-201ENST00000320578 MUS81Q96NY9 551 aa16.67■□□□□ 0.26
RAB39A-201ENST00000320578 OR1F2PQ96R84 312 aa16.67■□□□□ 0.26
RAB39A-201ENST00000320578 ANKRA2Q9H9E1 313 aa16.67■□□□□ 0.26
RAB39A-201ENST00000320578 CXorf21Q9HAI6 301 aa16.67■□□□□ 0.26
RAB39A-201ENST00000320578 POLE3Q9NRF9 147 aa16.67■□□□□ 0.26
RAB39A-201ENST00000320578 TUBA8Q9NY65 449 aaPredicted RBP16.67■□□□□ 0.26
RAB39A-201ENST00000320578 SERTAD3Q9UJW9 196 aa16.67■□□□□ 0.26
RAB39A-201ENST00000320578 SLC6A14Q9UN76 642 aa16.67■□□□□ 0.26
RAB39A-201ENST00000320578 IFT52Q9Y366 437 aa16.67■□□□□ 0.26
RAB39A-201ENST00000320578 MMACHCQ9Y4U1 282 aa16.67■□□□□ 0.26
RAB39A-201ENST00000320578 TMEM150CB9EJG8 249 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 OR10H2O60403 315 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 CER1O95813 267 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 ALPPP05187 535 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 ACP2P11117 423 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 RYKP34925 604 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 TUBA4AP68366 448 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 HPCAP84074 193 aa16.66■□□□□ 0.26
RAB39A-201ENST00000320578 STX4Q12846 297 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms