RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 THBS3P49746 956 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 CRYBB1P53674 252 aaPredicted RBP3.61□□□□□ -1.83
SMCO3-201ENST00000316048 DR1Q01658 176 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 GAGE5Q13069 117 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 GAGE6Q13070 117 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 PIGHQ14442 188 aaPredicted RBP3.61□□□□□ -1.83
SMCO3-201ENST00000316048 ZNF585BQ52M93 769 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 FUT10Q6P4F1 479 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 GPR141Q7Z602 305 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 SLC13A5Q86YT5 568 aaPredicted RBP3.61□□□□□ -1.83
SMCO3-201ENST00000316048 TMEM126BQ8IUX1 230 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 RCOR2Q8IZ40 523 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 OR4C3Q8NH37 302 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 SLC26A7Q8TE54 656 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 DNAJB3Q8WWF6 145 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 PIK3R3Q92569 461 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 CD101Q93033 1021 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 MAGOHBQ96A72 148 aaKnown RBP3.61□□□□□ -1.83
SMCO3-201ENST00000316048 LRRC45Q96CN5 670 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 NEDD4LQ96PU5 975 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 C17orf62Q9BQA9 187 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 MTG1Q9BT17 334 aaPredicted RBP3.61□□□□□ -1.83
SMCO3-201ENST00000316048 UBXN6Q9BZV1 441 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 ZBTB20Q9HC78 741 aaPredicted RBP3.61□□□□□ -1.83
SMCO3-201ENST00000316048 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.61□□□□□ -1.83
SMCO3-201ENST00000316048 PSORS1C1Q9UIG5 152 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 TMCC3Q9ULS5 477 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 HPCAL4Q9UM19 191 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 PCDHGB1Q9Y5G3 927 aa3.61□□□□□ -1.83
SMCO3-201ENST00000316048 ZNF236Q9UL36 1845 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 MCM3APO60318 1980 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 GOLGB1Q14789 3259 aaKnown RBP3.6□□□□□ -1.83
SMCO3-201ENST00000316048 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 TRBV5-5A0A0J9YX44 114 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 A0A1W2PS18 150 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 SIGLEC16A6NMB1 481 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 POLR3GO15318 223 aaPredicted RBP3.6□□□□□ -1.83
SMCO3-201ENST00000316048 MLNRO43193 412 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 PRPSAP2O60256 369 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 CIDEAO60543 219 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 RAD51DO75771 328 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 ATP1B1P05026 303 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 CHRNGP07510 517 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 KRT3P12035 628 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 LIFP15018 202 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 B4GALT1P15291 398 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 DESP17661 470 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 SFTPDP35247 375 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 DCTP40126 519 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 HOXA1P49639 335 aaPredicted RBP3.6□□□□□ -1.83
SMCO3-201ENST00000316048 MRPS25P82663 173 aaKnown RBP3.6□□□□□ -1.83
SMCO3-201ENST00000316048 ZXDBP98169 803 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 BEX3Q00994 111 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 IFT88Q13099 833 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 ACKR1Q16570 336 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 CCL14Q16627 93 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 HADHQ16836 314 aaKnown RBP3.6□□□□□ -1.83
SMCO3-201ENST00000316048 TECRLQ5HYJ1 363 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 AGAP6Q5VW22 663 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 UGT3A1Q6NUS8 523 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 DNAJC24Q6P3W2 148 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 CCDC137Q6PK04 289 aaKnown RBP3.6□□□□□ -1.83
SMCO3-201ENST00000316048 SCARA5Q6ZMJ2 495 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 ADAMTSL2Q86TH1 951 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 ZNF575Q86XF7 245 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 CCDC50Q8IVM0 306 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 LRRC52Q8N7C0 313 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 SCARB1Q8WTV0 552 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 ERP44Q9BS26 406 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 NTMT1Q9BV86 223 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 C6orf106Q9H6K1 298 aaPredicted RBP3.6□□□□□ -1.83
SMCO3-201ENST00000316048 LRRC19Q9H756 370 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 RNF121Q9H920 327 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 CHST11Q9NPF2 352 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 CD93Q9NPY3 652 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 GPR173Q9NS66 373 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 ZFP57Q9NU63 452 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 DONSONQ9NYP3 566 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 NDUFA13Q9P0J0 144 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 PCYOX1Q9UHG3 505 aa3.6□□□□□ -1.83
SMCO3-201ENST00000316048 BARX2Q9UMQ3 279 aaPredicted RBP3.6□□□□□ -1.83
SMCO3-201ENST00000316048 UBQLN1Q9UMX0 589 aaKnown RBP3.6□□□□□ -1.83
SMCO3-201ENST00000316048 GOLGA6L10A6NI86 522 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 VGLL3A8MV65 326 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 C2CD4DB7Z1M9 353 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 GOLGA8KD6RF30 607 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 ATP6V0E1O15342 81 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 PTBP3O95758 552 aaKnown RBP3.59□□□□□ -1.83
SMCO3-201ENST00000316048 GAS8O95995 478 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 KRT7P08729 469 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 IGHV4-38-2P0DP08 117 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 CYP3A5P20815 502 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 HOXD10P28358 340 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 COILP38432 576 aaPredicted RBP3.59□□□□□ -1.83
SMCO3-201ENST00000316048 CAMLGP49069 296 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 NR2C2P49116 596 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 FNTAP49354 379 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 CLDN17P56750 224 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 INCA1Q0VD86 236 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 CALCOCO2Q13137 446 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms