RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 SGPP1Q9BX95 441 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.91□□□□□ -0.34
DDX54-202ENST00000314045 PCDHGB7Q9Y5F8 929 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 CER1O95813 267 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 B3GALT4O96024 378 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 IGHA2P01877 340 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 CPMP14384 443 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 ENDOUP21128 410 aaKnown RBP12.91□□□□□ -0.34
DDX54-202ENST00000314045 CRISP1P54107 249 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 CD47Q08722 323 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 SGCBQ16585 318 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 LRIT3Q3SXY7 679 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 CLIP4Q8N3C7 705 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 ENKURQ8TC29 256 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 S100ZQ8WXG8 99 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 HDAC2Q92769 488 aaKnown RBP12.91□□□□□ -0.34
DDX54-202ENST00000314045 FAM118AQ9NWS6 357 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 RHBDL2Q9NX52 303 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 CNOT11Q9UKZ1 510 aaKnown RBP12.91□□□□□ -0.34
DDX54-202ENST00000314045 ARID2Q68CP9 1835 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 PLPP1O14494 284 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 FRS3O43559 492 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 EXOSC7Q15024 291 aaKnown RBP12.91□□□□□ -0.34
DDX54-202ENST00000314045 PTGES3Q15185 160 aaKnown RBP12.91□□□□□ -0.34
DDX54-202ENST00000314045 C18orf63Q68DL7 685 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 CNIH3Q8TBE1 160 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 CREB3L4Q8TEY5 395 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 TM4SF18Q96CE8 201 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 ZNF304Q9HCX3 659 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 AP1M2Q9Y6Q5 423 aa12.91□□□□□ -0.34
DDX54-202ENST00000314045 AHCYL1O43865 530 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 MITFO75030 526 aaPredicted RBP12.9□□□□□ -0.34
DDX54-202ENST00000314045 RPS15P62841 145 aaKnown RBP12.9□□□□□ -0.34
DDX54-202ENST00000314045 COX10Q12887 443 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 SYPL1Q16563 259 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 TRIM61Q5EBN2 209 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 CROCCP3Q8IVE0 287 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 ZNF548Q8NEK5 533 aaPredicted RBP12.9□□□□□ -0.34
DDX54-202ENST00000314045 UFD1Q92890 307 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 KCMF1Q9P0J7 381 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 PADI2Q9Y2J8 665 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 NUP214P35658 2090 aaPredicted RBP12.9□□□□□ -0.34
DDX54-202ENST00000314045 ZNF726A6NNF4 738 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 TRAPPC6AO75865 159 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 RPLP0P05388 317 aaKnown RBP12.9□□□□□ -0.34
DDX54-202ENST00000314045 ZNF41P51814 821 aaPredicted RBP12.9□□□□□ -0.34
DDX54-202ENST00000314045 ZNF773Q6PK81 442 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 SYT13Q7L8C5 426 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 HS3ST5Q8IZT8 346 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 HORMAD2Q8N7B1 307 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 PROKR2Q8NFJ6 384 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 RSC1A1Q92681 617 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 EFHD2Q96C19 240 aaPredicted RBP12.9□□□□□ -0.34
DDX54-202ENST00000314045 HSPBAP1Q96EW2 488 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 ELL3Q9HB65 397 aaPredicted RBP12.9□□□□□ -0.34
DDX54-202ENST00000314045 BTBD3Q9Y2F9 522 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 ATG4BQ9Y4P1 393 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 ASCC3Q8N3C0 2202 aaKnown RBP12.9□□□□□ -0.34
DDX54-202ENST00000314045 TRPM7Q96QT4 1865 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 OTOL1A6NHN0 477 aaPredicted RBP12.9□□□□□ -0.34
DDX54-202ENST00000314045 H3BSA7 217 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 NR0B1P51843 470 aaKnown RBP12.9□□□□□ -0.34
DDX54-202ENST00000314045 TUBA4AP68366 448 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 ROR2Q01974 943 aaKnown RBP12.9□□□□□ -0.34
DDX54-202ENST00000314045 UBALD2Q8IYN6 164 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 ZFPM2Q8WW38 1151 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 SEMA6CQ9H3T2 930 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 GAREM1Q9H706 876 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 CUTCQ9NTM9 273 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 RIMS3Q9UJD0 308 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 WDR37Q9Y2I8 494 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 PTPRFP10586 1907 aa12.9□□□□□ -0.34
DDX54-202ENST00000314045 OR5K3A6NET4 321 aa12.9□□□□□ -0.35
DDX54-202ENST00000314045 ABCB7O75027 752 aa12.9□□□□□ -0.35
DDX54-202ENST00000314045 DRD3P35462 400 aa12.9□□□□□ -0.35
DDX54-202ENST00000314045 KCTD21Q4G0X4 260 aa12.9□□□□□ -0.35
DDX54-202ENST00000314045 CBLL1Q75N03 491 aa12.9□□□□□ -0.35
DDX54-202ENST00000314045 NRG4Q8WWG1 115 aa12.9□□□□□ -0.35
DDX54-202ENST00000314045 ASPNQ9BXN1 380 aa12.9□□□□□ -0.35
DDX54-202ENST00000314045 OTOFQ9HC10 1997 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 SOX1O00570 391 aaPredicted RBP12.89□□□□□ -0.35
DDX54-202ENST00000314045 OXSR1O95747 527 aaPredicted RBP12.89□□□□□ -0.35
DDX54-202ENST00000314045 ARAFP10398 606 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 GCGRP47871 477 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 MLLT10P55197 1068 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 ALKBH2Q6NS38 261 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 ZCCHC12Q6PEW1 402 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 KLHL36Q8N4N3 616 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 CRELD1Q96HD1 420 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 HS6ST2Q96MM7 605 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 AGPAT4Q9NRZ5 378 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 FGF21Q9NSA1 209 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 ASIC5Q9NY37 505 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 RLFQ13129 1914 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 LRIT2A6NDA9 550 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 DPP6P42658 865 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 CRYZQ08257 329 aaKnown RBP12.89□□□□□ -0.35
DDX54-202ENST00000314045 FAM71E1Q6IPT2 247 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 IZUMO1Q8IYV9 350 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 OR8J1Q8NGP2 316 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms