RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 J3KR12 359 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 LYRM1O43325 122 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 CRYZL1O95825 349 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 ACP2P11117 423 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 SMPD1P17405 629 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 DCTP40126 519 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 CEACAM7Q14002 265 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 PHC2Q8IXK0 858 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 ZNF709Q8N972 641 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 MTFMTQ96DP5 389 aaKnown RBP8.4□□□□□ -1.06
COL6A5-202ENST00000312481 ZNF764Q96H86 408 aaPredicted RBP8.4□□□□□ -1.06
COL6A5-202ENST00000312481 ABCB8Q9NUT2 735 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 ANKRD33BA6NCL7 494 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 NEDD8-MDP1E9PL57 170 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 GP1BBP13224 206 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 HOXD12P35452 270 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 PMS2P3Q13401 168 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 BTBD16Q32M84 506 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 RNF44Q7L0R7 432 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 TIPARPQ7Z3E1 657 aaKnown RBP8.4□□□□□ -1.06
COL6A5-202ENST00000312481 OR52N1Q8NH53 320 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 ELMOD3Q96FG2 381 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 DPH2Q9BQC3 489 aaPredicted RBP8.4□□□□□ -1.06
COL6A5-202ENST00000312481 CACNG6Q9BXT2 260 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 IGSF5Q9NSI5 407 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 PCDHAC2Q9Y5I4 1007 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 TIMM13Q9Y5L4 95 aaPredicted RBP8.4□□□□□ -1.06
COL6A5-202ENST00000312481 TRDV1A0A1B0GX56 115 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 GPR37L1O60883 481 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 S100A8P05109 93 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 JUNDP17535 347 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 HSPB3Q12988 150 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 NHSL2Q5HYW2 709 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 VN1R5Q7Z5H4 357 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 SLC9A6Q92581 669 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 NSMAFQ92636 917 aa8.4□□□□□ -1.06
COL6A5-202ENST00000312481 FAM149AA5PLN7 773 aa8.4□□□□□ -1.07
COL6A5-202ENST00000312481 JUNP05412 331 aaKnown RBP8.4□□□□□ -1.07
COL6A5-202ENST00000312481 ADH5P11766 374 aa8.4□□□□□ -1.07
COL6A5-202ENST00000312481 DDOSTP39656 456 aa8.4□□□□□ -1.07
COL6A5-202ENST00000312481 EOGTQ5NDL2 527 aa8.4□□□□□ -1.07
COL6A5-202ENST00000312481 UBXN11Q5T124 520 aa8.4□□□□□ -1.07
COL6A5-202ENST00000312481 RGL4Q8IZJ4 473 aa8.4□□□□□ -1.07
COL6A5-202ENST00000312481 ACOT11Q8WXI4 607 aaPredicted RBP8.4□□□□□ -1.07
COL6A5-202ENST00000312481 AHSA1O95433 338 aa8.4□□□□□ -1.07
COL6A5-202ENST00000312481 NELFEP18615 380 aaKnown RBP8.4□□□□□ -1.07
COL6A5-202ENST00000312481 HSD11B1P28845 292 aa8.4□□□□□ -1.07
COL6A5-202ENST00000312481 TAS2R19P59542 299 aa8.4□□□□□ -1.07
COL6A5-202ENST00000312481 POU6F2P78424 691 aaPredicted RBP8.4□□□□□ -1.07
COL6A5-202ENST00000312481 EMC4Q5J8M3 183 aa8.4□□□□□ -1.07
COL6A5-202ENST00000312481 CHADLQ6NUI6 762 aa8.4□□□□□ -1.07
COL6A5-202ENST00000312481 ANKRD46Q86W74 232 aa8.4□□□□□ -1.07
COL6A5-202ENST00000312481 PGLYRP2Q96PD5 576 aa8.4□□□□□ -1.07
COL6A5-202ENST00000312481 GFM1Q96RP9 751 aaKnown RBP8.4□□□□□ -1.07
COL6A5-202ENST00000312481 IMP3Q9NV31 184 aaKnown RBP8.4□□□□□ -1.07
COL6A5-202ENST00000312481 DLGAP4Q9Y2H0 992 aa8.4□□□□□ -1.07
COL6A5-202ENST00000312481 TMEM98Q9Y2Y6 226 aa8.4□□□□□ -1.07
COL6A5-202ENST00000312481 TCRBV7S3A2A0A539 114 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 TRIM64CA6NLI5 447 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 FMO6PO60774 539 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 IFNA10P01566 189 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 HRGP04196 525 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 IFNA4P05014 189 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 BRCC3P46736 316 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 ZNF140P52738 457 aaPredicted RBP8.39□□□□□ -1.07
COL6A5-202ENST00000312481 LRRC32Q14392 662 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 ALG10Q5BKT4 473 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 LYSMD3Q7Z3D4 306 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 RABEPKQ7Z6M1 372 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 FAM109AQ8N4B1 249 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 SLC22A14Q9Y267 594 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 DOCK8Q8NF50 2099 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 C1orf196B1AJZ1 125 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 PCDH17O14917 1159 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 PSMA6P60900 246 aaKnown RBP8.39□□□□□ -1.07
COL6A5-202ENST00000312481 GALK2Q01415 458 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 PLK5Q496M5 336 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 MLIPQ5VWP3 458 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 YIPF7Q8N8F6 280 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 OR6K6Q8NGW6 343 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 NDNFQ8TB73 568 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 KLHL15Q96M94 604 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 NECTIN4Q96NY8 510 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 SLC39A1Q9NY26 324 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 ZNF726A6NNF4 738 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 NME4O00746 187 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 SOCS2O14508 198 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 NUDT21O43809 227 aaKnown RBP8.39□□□□□ -1.07
COL6A5-202ENST00000312481 PRAMEF2O60811 474 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 IFNA2P01563 188 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 GTF2F2P13984 249 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 CST5P28325 142 aaPredicted RBP8.39□□□□□ -1.07
COL6A5-202ENST00000312481 SLC30A6Q6NXT4 461 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 OR7G1Q8NGA0 311 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 MAFIPQ8WZ33 124 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 TFGQ92734 400 aaPredicted RBP8.39□□□□□ -1.07
COL6A5-202ENST00000312481 ORAI3Q9BRQ5 295 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 TMEM246Q9BRR3 403 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 SERTM1A2A2V5 107 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 NPIPA5E9PKD4 350 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms