RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 SUSD6Q92537 303 aa14.26□□□□□ -0.13
CSDC2-201ENST00000306149 SNX18Q96RF0 628 aa14.26□□□□□ -0.13
CSDC2-201ENST00000306149 BBS4Q96RK4 519 aa14.26□□□□□ -0.13
CSDC2-201ENST00000306149 INSM2Q96T92 566 aaPredicted RBP14.26□□□□□ -0.13
CSDC2-201ENST00000306149 TMEM245Q9H330 911 aa14.26□□□□□ -0.13
CSDC2-201ENST00000306149 EQTNQ9NQ60 294 aa14.26□□□□□ -0.13
CSDC2-201ENST00000306149 SLC35C2Q9NQQ7 365 aa14.26□□□□□ -0.13
CSDC2-201ENST00000306149 N6AMT1Q9Y5N5 214 aa14.26□□□□□ -0.13
CSDC2-201ENST00000306149 HMGN2P05204 90 aaKnown RBP14.26□□□□□ -0.13
CSDC2-201ENST00000306149 VASPP50552 380 aaPredicted RBP14.26□□□□□ -0.13
CSDC2-201ENST00000306149 HOXC5Q00444 222 aa14.26□□□□□ -0.13
CSDC2-201ENST00000306149 FUT5Q11128 374 aa14.26□□□□□ -0.13
CSDC2-201ENST00000306149 MLLT11Q13015 90 aaPredicted RBP14.26□□□□□ -0.13
CSDC2-201ENST00000306149 FAM78AQ5JUQ0 283 aa14.26□□□□□ -0.13
CSDC2-201ENST00000306149 C22orf42Q6IC83 251 aa14.26□□□□□ -0.13
CSDC2-201ENST00000306149 PROKR2Q8NFJ6 384 aa14.26□□□□□ -0.13
CSDC2-201ENST00000306149 JPH3Q8WXH2 748 aaPredicted RBP14.26□□□□□ -0.13
CSDC2-201ENST00000306149 QRFPRQ96P65 431 aa14.26□□□□□ -0.13
CSDC2-201ENST00000306149 SRRQ9GZT4 340 aa14.26□□□□□ -0.13
CSDC2-201ENST00000306149 FBXW2Q9UKT8 454 aa14.26□□□□□ -0.13
CSDC2-201ENST00000306149 ACAD8Q9UKU7 415 aa14.26□□□□□ -0.13
CSDC2-201ENST00000306149 MYO9BQ13459 2157 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 SCN2AQ99250 2005 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 LRIT2A6NDA9 550 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 OR52A4PA6NMU1 304 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 PAK4O96013 591 aaPredicted RBP14.25□□□□□ -0.13
CSDC2-201ENST00000306149 RPA4Q13156 261 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 SNAPC1Q16533 368 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 OCLNQ16625 522 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 GPAT3Q53EU6 434 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 CLEC12AQ5QGZ9 265 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 CRISPLD2Q9H0B8 497 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 PRSS16Q9NQE7 514 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 MOSPD1Q9UJG1 213 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 HCN2Q9UL51 889 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 ATG4BQ9Y4P1 393 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 SPIN1Q9Y657 262 aaPredicted RBP14.25□□□□□ -0.13
CSDC2-201ENST00000306149 A8MV72 311 aaPredicted RBP14.25□□□□□ -0.13
CSDC2-201ENST00000306149 DDX5P17844 614 aaKnown RBP14.25□□□□□ -0.13
CSDC2-201ENST00000306149 DDOSTP39656 456 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 DAB2P98082 770 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 ARMC4Q5T2S8 1044 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 PIP5KL1Q5T9C9 394 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 C18orf63Q68DL7 685 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 TMEM107Q6UX40 140 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 KIF18BQ86Y91 864 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 RAB43Q86YS6 212 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 ZFP41Q8N8Y5 198 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 CREB3L4Q8TEY5 395 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 SLC9A6Q92581 669 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 ZNF582Q96NG8 517 aaPredicted RBP14.25□□□□□ -0.13
CSDC2-201ENST00000306149 DDX31Q9H8H2 851 aaKnown RBP14.25□□□□□ -0.13
CSDC2-201ENST00000306149 TOR4AQ9NXH8 423 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 SSR3Q9UNL2 185 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 CMAHPQ9Y471 501 aa14.25□□□□□ -0.13
CSDC2-201ENST00000306149 A0A0A6YYD5 115 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 A0A1W2PRQ8 180 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 ERI3O43414 337 aaKnown RBP14.24□□□□□ -0.13
CSDC2-201ENST00000306149 TBX19O60806 448 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 FHP07954 510 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 TRAPPC2P0DI81 140 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 TRAPPC2BP0DI82 140 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 IL7P13232 177 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 PPP2R1BP30154 601 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 RUNX1T1Q06455 604 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 SLAMF1Q13291 335 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 C1DQ13901 141 aaKnown RBP14.24□□□□□ -0.13
CSDC2-201ENST00000306149 ARHGAP19Q14CB8 494 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 SYT14Q8NB59 555 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 OR2A1Q8NGT9 310 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 GATAD2BQ8WXI9 593 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 SMG7Q92540 1137 aaKnown RBP14.24□□□□□ -0.13
CSDC2-201ENST00000306149 SYNPO2LQ9H987 977 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 ACSS1Q9NUB1 689 aaPredicted RBP14.24□□□□□ -0.13
CSDC2-201ENST00000306149 CNIH4Q9P003 139 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 SERGEFQ9UGK8 458 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 MDC1Q14676 2089 aaKnown RBP14.24□□□□□ -0.13
CSDC2-201ENST00000306149 TRANK1O15050 2925 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 TFECO14948 347 aaPredicted RBP14.24□□□□□ -0.13
CSDC2-201ENST00000306149 MID1O15344 667 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 CH25HO95992 272 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 CD79BP40259 229 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 BCL6P41182 706 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 CAV3P56539 151 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 TAS2R38P59533 333 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 RAB8AP61006 207 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 LARS2Q15031 903 aaKnown RBP14.24□□□□□ -0.13
CSDC2-201ENST00000306149 ADAMTSL4Q6UY14 1074 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 DGLUCYQ7Z3D6 616 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 UBE2J2Q8N2K1 259 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 NATD1Q8N6N6 113 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 MORN4Q8NDC4 146 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 RASSF5Q8WWW0 418 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 CNRIP1Q96F85 164 aaPredicted RBP14.24□□□□□ -0.13
CSDC2-201ENST00000306149 TM9SF2Q99805 663 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 ABCB9Q9NP78 766 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 TXNL4BQ9NX01 149 aaKnown RBP14.24□□□□□ -0.13
CSDC2-201ENST00000306149 SLC9A8Q9Y2E8 581 aa14.24□□□□□ -0.13
CSDC2-201ENST00000306149 GPR55Q9Y2T6 319 aaPredicted RBP14.24□□□□□ -0.13
CSDC2-201ENST00000306149 A0A1W2PR48 441 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms