RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 LOC100506127A0A0U1RQW1 187 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 CCDC182A6NF36 153 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 MFSD2BA6NFX1 497 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 KHNYNO15037 678 aaKnown RBP5.12□□□□□ -1.59
VPS50-202ENST00000305866 FOXS1O43638 330 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 VEGFDO43915 354 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 PAHP00439 452 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 GABRA5P31644 462 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 CTSOP43234 321 aaPredicted RBP5.12□□□□□ -1.59
VPS50-202ENST00000305866 TSFMP43897 325 aaKnown RBP5.12□□□□□ -1.59
VPS50-202ENST00000305866 CAV3P56539 151 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 KRR1Q13601 381 aaKnown RBP5.12□□□□□ -1.59
VPS50-202ENST00000305866 MINDY4Q4G0A6 757 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 ARHGAP15Q53QZ3 475 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.12□□□□□ -1.59
VPS50-202ENST00000305866 C16orf59Q7L2K0 433 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 AQP11Q8NBQ7 271 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 OR4Q3Q8NH05 313 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 THAP4Q8WY91 577 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 SMG7Q92540 1137 aaKnown RBP5.12□□□□□ -1.59
VPS50-202ENST00000305866 GLYATL1Q969I3 302 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 HDAC8Q9BY41 377 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 MFRPQ9BY79 579 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 POLR2J2Q9GZM3 115 aaKnown RBP5.12□□□□□ -1.59
VPS50-202ENST00000305866 SLC22A4Q9H015 551 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 POLR2J3Q9H1A7 115 aaKnown RBP5.12□□□□□ -1.59
VPS50-202ENST00000305866 ABCG8Q9H221 673 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 MED9Q9NWA0 146 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 ARL15Q9NXU5 204 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 CFAP54Q96N23 3096 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 SPENQ96T58 3664 aaKnown RBP5.12□□□□□ -1.59
VPS50-202ENST00000305866 B8ZZF3 427 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 SLC9A3R1O14745 358 aaPredicted RBP5.12□□□□□ -1.59
VPS50-202ENST00000305866 TEX28O15482 410 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 TGM5O43548 720 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 HNRNPA1P09651 372 aaKnown RBP eCLIP5.12□□□□□ -1.59
VPS50-202ENST00000305866 C1GALT1C1LP0DN25 315 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 DRD2P14416 443 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 UQCRC2P22695 453 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 BSGP35613 385 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 CDH12P55289 794 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 REEP5Q00765 189 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 CDH18Q13634 790 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 GTF2H3Q13889 308 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 GPR176Q14439 515 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 IFI44LQ53G44 452 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 RPS26P11Q5JNZ5 115 aaPredicted RBP5.12□□□□□ -1.59
VPS50-202ENST00000305866 AGTRAPQ6RW13 159 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 DPY19L3Q6ZPD9 716 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 C11orf74Q86VG3 221 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 HS6ST3Q8IZP7 471 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 ARL14EPQ8N8R7 260 aaPredicted RBP5.12□□□□□ -1.59
VPS50-202ENST00000305866 C11orf65Q8NCR3 313 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 OR2L2Q8NH16 312 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 GEMIN6Q8WXD5 167 aaKnown RBP5.12□□□□□ -1.59
VPS50-202ENST00000305866 NEIL2Q969S2 332 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 QRFPRQ96P65 431 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 MND1Q9BWT6 205 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 ELOVL6Q9H5J4 265 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 CDCP1Q9H5V8 836 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 EVA1AQ9H8M9 152 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 LRFN2Q9ULH4 789 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 CARD8Q9Y2G2 431 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 CSNK1G3Q9Y6M4 447 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 TEX51A0A1B0GUA7 166 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 A0A1W2PPV9 198 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 SELENOFO60613 162 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 HPGDSO60760 199 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 SLC22A5O76082 557 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 HOXC4P09017 264 aaPredicted RBP5.12□□□□□ -1.59
VPS50-202ENST00000305866 ELK1P19419 428 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 UBE3AQ05086 875 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 CHIT1Q13231 466 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 SCARB2Q14108 478 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 OR2G6Q5TZ20 316 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 NXPE4Q6UWF7 544 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 LIPIQ6XZB0 460 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 ZNF547Q8IVP9 402 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 CMTM8Q8IZV2 173 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 ZNF687Q8N1G0 1237 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 ATG16L2Q8NAA4 619 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 SUN3Q8TAQ9 357 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 SFXN5Q8TD22 340 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 C16orf78Q8WTQ4 265 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 CREB3L1Q96BA8 519 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 GIMAP5Q96F15 307 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 ZC3H10Q96K80 434 aaKnown RBP5.12□□□□□ -1.59
VPS50-202ENST00000305866 FAM83DQ9H4H8 585 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 DDX31Q9H8H2 851 aaKnown RBP5.12□□□□□ -1.59
VPS50-202ENST00000305866 ZNF223Q9UK11 482 aaPredicted RBP5.12□□□□□ -1.59
VPS50-202ENST00000305866 ANGPTL3Q9Y5C1 460 aa5.12□□□□□ -1.59
VPS50-202ENST00000305866 IGKV1-8A0A0C4DH67 115 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 OR2M5A3KFT3 312 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 FAM170BA6NMN3 283 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 PDZK1P1A8MUH7 402 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 A8MXK9 166 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 TPD52L2O43399 206 aaKnown RBP5.11□□□□□ -1.59
VPS50-202ENST00000305866 TSPAN3O60637 253 aa5.11□□□□□ -1.59
VPS50-202ENST00000305866 KCNJ13O60928 360 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms