RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 FAM172BPA6NC97 362 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 FAM159BA6NKW6 160 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 FLRT2O43155 660 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 GPR39O43194 453 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 GFRA3O60609 400 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 AK1P00568 194 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 NR4A1P22736 598 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 SGSHP51688 502 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 ADPRHP54922 357 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 TRIP6Q15654 476 aaKnown RBP6.75□□□□□ -1.33
RAG1-201ENST00000299440 CYBRD1Q53TN4 286 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 AGAP7PQ5VUJ5 663 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 CES4AQ5XG92 561 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 CCSAPQ6IQ19 270 aaPredicted RBP6.75□□□□□ -1.33
RAG1-201ENST00000299440 ZNF662Q6ZS27 426 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 KDM1BQ8NB78 822 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 OR9I1Q8NGQ6 314 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 FBXL8Q96CD0 374 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 AGAP4Q96P64 663 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 PAPOLGQ9BWT3 736 aaKnown RBP6.75□□□□□ -1.33
RAG1-201ENST00000299440 CADM1Q9BY67 442 aaKnown RBP6.75□□□□□ -1.33
RAG1-201ENST00000299440 ACTRT3Q9BYD9 372 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 POLR2J2Q9GZM3 115 aaKnown RBP6.75□□□□□ -1.33
RAG1-201ENST00000299440 TM9SF3Q9HD45 589 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 C2orf42Q9NWW7 574 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 RHBDL2Q9NX52 303 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 PPP1R14DQ9NXH3 145 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 GJB3O75712 270 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 RAB15P59190 212 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 KCNC4Q03721 635 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 MGAT3Q09327 533 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 DNASE1L3Q13609 305 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 WSCD2Q2TBF2 565 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 DENND5AQ6IQ26 1287 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 PROKR1Q8TCW9 393 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 EBF4Q9BQW3 602 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 NUDT22Q9BRQ3 303 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 OSBPL11Q9BXB4 747 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 LRRN3Q9H3W5 708 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 TRPV4Q9HBA0 871 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 TRPV5Q9NQA5 729 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 IL20RAQ9UHF4 553 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 LIPT1Q9Y234 373 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 PLEKHM1Q9Y4G2 1056 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 TEX13DA0A0J9YY54 714 aaPredicted RBP6.75□□□□□ -1.33
RAG1-201ENST00000299440 METTL21EPA6NDL7 271 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 BTBD17A6NE02 478 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 PPM1BO75688 479 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 CHRM4P08173 479 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 RAP2AP10114 183 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 SCAPQ12770 1279 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 LAPTM4AQ15012 233 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 MSS51Q4VC12 460 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 C10orf62Q5T681 223 aaPredicted RBP6.75□□□□□ -1.33
RAG1-201ENST00000299440 SLC22A16Q86VW1 577 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 MED18Q9BUE0 208 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 GPN1Q9HCN4 374 aaPredicted RBP6.75□□□□□ -1.33
RAG1-201ENST00000299440 REV1Q9UBZ9 1251 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 ICKQ9UPZ9 632 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 C5orf51A6NDU8 294 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 UNC119BA6NIH7 251 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 ANKRD30BLA7E2S9 258 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 AURKAO14965 403 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 LPLP06858 475 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 AZGP1P25311 298 aaKnown RBP6.75□□□□□ -1.33
RAG1-201ENST00000299440 PRDX3P30048 256 aaKnown RBP6.75□□□□□ -1.33
RAG1-201ENST00000299440 CSNK1A1P48729 337 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 PRKXP51817 358 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 NDUFA5Q16718 116 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 MANEALQ5VSG8 457 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.75□□□□□ -1.33
RAG1-201ENST00000299440 RBM15BQ8NDT2 890 aaKnown RBP6.75□□□□□ -1.33
RAG1-201ENST00000299440 OR2I1PQ8NGU4 316 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 MCFD2Q8NI22 146 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 LRRC15Q8TF66 581 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 BIRC7Q96CA5 298 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 ZNF597Q96LX8 424 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 TRAPPC9Q96Q05 1148 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 HCAR1Q9BXC0 346 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 PCDHAC1Q9H158 963 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 POPDC3Q9HBV1 291 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 SMCO3A2RU48 225 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 GPIP06744 558 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 UBL4AP11441 157 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 GNRHRP30968 328 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 TRAP1Q12931 704 aaKnown RBP6.75□□□□□ -1.33
RAG1-201ENST00000299440 PDK3Q15120 406 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 PERM1Q5SV97 790 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 SVOPLQ8N434 492 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 BANPQ8N9N5 519 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 GNPDA2Q8TDQ7 276 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 ZNF355PQ9NSJ1 428 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 HS3ST3A1Q9Y663 406 aa6.75□□□□□ -1.33
RAG1-201ENST00000299440 HTRA2O43464 458 aaPredicted RBP6.74□□□□□ -1.33
RAG1-201ENST00000299440 TIMM8AO60220 97 aaPredicted RBP6.74□□□□□ -1.33
RAG1-201ENST00000299440 C1SP09871 688 aa6.74□□□□□ -1.33
RAG1-201ENST00000299440 ARL3P36405 182 aa6.74□□□□□ -1.33
RAG1-201ENST00000299440 LEPRP48357 1165 aaKnown RBP6.74□□□□□ -1.33
RAG1-201ENST00000299440 EMX2Q04743 252 aa6.74□□□□□ -1.33
RAG1-201ENST00000299440 SLC5A9Q2M3M2 681 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms