RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 PGAP3Q96FM1 320 aaPredicted RBP6.58□□□□□ -1.36
GAPVD1-202ENST00000297933 MS4A4EQ96PG1 132 aa6.58□□□□□ -1.36
GAPVD1-202ENST00000297933 OAZ3Q9UMX2 235 aa6.58□□□□□ -1.36
GAPVD1-202ENST00000297933 PSAT1Q9Y617 370 aa6.58□□□□□ -1.36
GAPVD1-202ENST00000297933 GXYLT2A0PJZ3 443 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 SHISA7A6NL88 538 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 ANHXE9PGG2 379 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 FOXE1O00358 373 aaPredicted RBP6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 SLC16A8O95907 504 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 S100A9P06702 114 aaKnown RBP6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 MMP2P08253 660 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 F3P13726 295 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 FAM26DQ5JW98 314 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 SLC18B1Q6NT16 456 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 SLC27A4Q6P1M0 643 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 LEG1Q6P5S2 330 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 ZNF765Q7L2R6 523 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 SNX29P2Q8IUI4 249 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 GRAMD2AQ8IUY3 354 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 OR9A4Q8NGU2 314 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 MYRFLQ96LU7 910 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 FAM129BQ96TA1 746 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 ITPAQ9BY32 194 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 ENKD1Q9H0I2 346 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 EHD1Q9H4M9 534 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 DNAJB11Q9UBS4 358 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 KCNK5O95279 499 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 FCER2P06734 321 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 SLC2A2P11168 524 aaPredicted RBP6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 PSKH1P11801 424 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 RAC2P15153 192 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 ATF6P18850 670 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 RPS3P23396 243 aaKnown RBP eCLIP6.57□□□□□ -1.365e-28■■■□□ 15.7
GAPVD1-202ENST00000297933 GRPRP30550 384 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 FOXN2P32314 431 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 FNTBP49356 437 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 DCDC1P59894 354 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 PPP1R8Q12972 351 aaKnown RBP6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 CTC1Q2NKJ3 1217 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 TYSND1Q2T9J0 566 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 RABL3Q5HYI8 236 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 MARCH8Q5T0T0 291 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 RNF38Q9H0F5 515 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 OR51B6Q9H340 312 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 NUP50Q9UKX7 468 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 ERVK-19Q9WJR5 959 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 CDH10Q9Y6N8 788 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 CHD4Q14839 1912 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 A0A1B0GVC2 190 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 C13orf42A0A1B0GVH6 325 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 ETS2P15036 469 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 NDUFV2P19404 249 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 ACVR1BP36896 505 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 DAP3P51398 398 aaKnown RBP6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 MAZP56270 477 aaKnown RBP6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 IGDCC3Q8IVU1 814 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 ZNF619Q8N2I2 560 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 NPWQ8N729 165 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 OR8J3Q8NGG0 315 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 WDR20Q8TBZ3 569 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 UCN3Q969E3 161 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 NECAB3Q96P71 396 aaPredicted RBP6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 POT1Q9NUX5 634 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 GHRLQ9UBU3 117 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 PCDHGB6Q9Y5F9 930 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 CCDC88AQ3V6T2 1871 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 DRGXA6NNA5 263 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 ANKRD30BLA7E2S9 258 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 LCATP04180 440 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 ITIH1P19827 911 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 MAGEA2P43356 314 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 AP2S1P53680 142 aaPredicted RBP6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 DCDP81605 110 aaKnown RBP6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 DNASE1L3Q13609 305 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 PTGR1Q14914 329 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 C18orf21Q32NC0 220 aaPredicted RBP6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 UNC50Q53HI1 259 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 IL20RBQ6UXL0 311 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 ZC3H3Q8IXZ2 948 aaKnown RBP6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 ANKK1Q8NFD2 765 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 PPP1R35Q8TAP8 253 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 FKBP10Q96AY3 582 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 ECHDC3Q96DC8 303 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 ATG5Q9H1Y0 275 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 CXorf21Q9HAI6 301 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 CD320Q9NPF0 282 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 ABRACLQ9P1F3 81 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 ZNF221Q9UK13 617 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 KANTRA0A1W2PQU2 76 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 SMCO3A2RU48 225 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 ZSCAN5BA6NJL1 495 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 UBL4AP11441 157 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 ARSDP51689 593 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 AQP4P55087 323 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 CTXN1P60606 82 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 ADAM15Q13444 863 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 OR4D1Q15615 310 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 TMEM31Q5JXX7 168 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 TMEM240Q5SV17 173 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 KIAA1614Q5VZ46 1190 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms