RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 GOLGA6L1Q8N7Z2 621 aa23.16■■□□□ 1.3
PDF-201ENST00000288022 PAQR8Q8TEZ7 354 aa23.16■■□□□ 1.3
PDF-201ENST00000288022 AMDHD1Q96NU7 426 aa23.16■■□□□ 1.3
PDF-201ENST00000288022 ACOT7O00154 380 aa23.15■■□□□ 1.3
PDF-201ENST00000288022 ASNA1O43681 348 aa23.15■■□□□ 1.3
PDF-201ENST00000288022 PLOD3O60568 738 aa23.15■■□□□ 1.3
PDF-201ENST00000288022 H2AFXP16104 143 aaPredicted RBP23.15■■□□□ 1.3
PDF-201ENST00000288022 MC3RP41968 323 aa23.15■■□□□ 1.3
PDF-201ENST00000288022 FBXW4P57775 412 aa23.15■■□□□ 1.3
PDF-201ENST00000288022 RPS6KA2Q15349 733 aa23.15■■□□□ 1.3
PDF-201ENST00000288022 ATG16L1Q676U5 607 aa23.15■■□□□ 1.3
PDF-201ENST00000288022 R3HCC1LQ7Z5L2 792 aaKnown RBP23.15■■□□□ 1.3
PDF-201ENST00000288022 TRIM42Q8IWZ5 723 aa23.15■■□□□ 1.3
PDF-201ENST00000288022 CIDECQ96AQ7 238 aaPredicted RBP23.15■■□□□ 1.3
PDF-201ENST00000288022 MAGED4Q96JG8 741 aa23.15■■□□□ 1.3
PDF-201ENST00000288022 PNPOQ9NVS9 261 aa23.15■■□□□ 1.3
PDF-201ENST00000288022 TAS2R9Q9NYW1 312 aa23.15■■□□□ 1.3
PDF-201ENST00000288022 CNIH4Q9P003 139 aa23.15■■□□□ 1.3
PDF-201ENST00000288022 EIF3LQ9Y262 564 aaKnown RBP23.15■■□□□ 1.3
PDF-201ENST00000288022 SLC5A6Q9Y289 635 aa23.15■■□□□ 1.3
PDF-201ENST00000288022 CHCHD2Q9Y6H1 151 aaPredicted RBP23.15■■□□□ 1.3
PDF-201ENST00000288022 FAM166BA8MTA8 275 aa23.14■■□□□ 1.29
PDF-201ENST00000288022 HS6ST1O60243 411 aa23.14■■□□□ 1.29
PDF-201ENST00000288022 COQ9O75208 318 aa23.14■■□□□ 1.29
PDF-201ENST00000288022 NME6O75414 186 aaPredicted RBP23.14■■□□□ 1.29
PDF-201ENST00000288022 SLITRK5O94991 958 aa23.14■■□□□ 1.29
PDF-201ENST00000288022 PRPS2P11908 318 aa23.14■■□□□ 1.29
PDF-201ENST00000288022 DDX5P17844 614 aaKnown RBP23.14■■□□□ 1.29
PDF-201ENST00000288022 DRD5P21918 477 aa23.14■■□□□ 1.29
PDF-201ENST00000288022 ABCD3P28288 659 aa23.14■■□□□ 1.29
PDF-201ENST00000288022 GPC1P35052 558 aa23.14■■□□□ 1.29
PDF-201ENST00000288022 PPICP45877 212 aa23.14■■□□□ 1.29
PDF-201ENST00000288022 PPIAP62937 165 aaKnown RBP23.14■■□□□ 1.29
PDF-201ENST00000288022 KCNJ2P63252 427 aa23.14■■□□□ 1.29
PDF-201ENST00000288022 PLCXD2Q0VAA5 305 aa23.14■■□□□ 1.29
PDF-201ENST00000288022 HSPB3Q12988 150 aa23.14■■□□□ 1.29
PDF-201ENST00000288022 MAD2L1Q13257 205 aaPredicted RBP23.14■■□□□ 1.29
PDF-201ENST00000288022 PDE7AQ13946 482 aa23.14■■□□□ 1.29
PDF-201ENST00000288022 ZNF385BQ569K4 471 aa23.14■■□□□ 1.29
PDF-201ENST00000288022 GHDCQ8N2G8 530 aa23.14■■□□□ 1.29
PDF-201ENST00000288022 FBXW8Q8N3Y1 598 aa23.14■■□□□ 1.29
PDF-201ENST00000288022 ZFP28Q8NHY6 868 aa23.14■■□□□ 1.29
PDF-201ENST00000288022 DIO2Q92813 273 aa23.14■■□□□ 1.29
PDF-201ENST00000288022 MTERF3Q96E29 417 aa23.14■■□□□ 1.29
PDF-201ENST00000288022 HSPBAP1Q96EW2 488 aa23.14■■□□□ 1.29
PDF-201ENST00000288022 ZNF764Q96H86 408 aaPredicted RBP23.14■■□□□ 1.29
PDF-201ENST00000288022 ATP6V1G3Q96LB4 118 aa23.14■■□□□ 1.29
PDF-201ENST00000288022 SH2D2AQ9NP31 389 aa23.14■■□□□ 1.29
PDF-201ENST00000288022 DDX18Q9NVP1 670 aaKnown RBP23.14■■□□□ 1.29
PDF-201ENST00000288022 HAO1Q9UJM8 370 aa23.14■■□□□ 1.29
PDF-201ENST00000288022 FRG2CA6NGY1 282 aa23.13■■□□□ 1.29
PDF-201ENST00000288022 ACOX3O15254 700 aa23.13■■□□□ 1.29
PDF-201ENST00000288022 CDC40O60508 579 aaKnown RBP eCLIP23.13■■□□□ 1.29
PDF-201ENST00000288022 TBX19O60806 448 aa23.13■■□□□ 1.29
PDF-201ENST00000288022 ERN1O75460 977 aaKnown RBP23.13■■□□□ 1.29
PDF-201ENST00000288022 RPL3P39023 403 aaKnown RBP23.13■■□□□ 1.29
PDF-201ENST00000288022 ZNF155Q12901 538 aaPredicted RBP23.13■■□□□ 1.29
PDF-201ENST00000288022 PTGR1Q14914 329 aa23.13■■□□□ 1.29
PDF-201ENST00000288022 ZNF551Q7Z340 670 aaPredicted RBP23.13■■□□□ 1.29
PDF-201ENST00000288022 SLC22A16Q86VW1 577 aa23.13■■□□□ 1.29
PDF-201ENST00000288022 RAB3IL1Q8TBN0 382 aa23.13■■□□□ 1.29
PDF-201ENST00000288022 OMA1Q96E52 524 aa23.13■■□□□ 1.29
PDF-201ENST00000288022 ZBED6CLQ96FA7 236 aaPredicted RBP23.13■■□□□ 1.29
PDF-201ENST00000288022 TTTY12Q9BZ98 90 aa23.13■■□□□ 1.29
PDF-201ENST00000288022 NUF2Q9BZD4 464 aa23.13■■□□□ 1.29
PDF-201ENST00000288022 FOLH1BQ9HBA9 442 aa23.13■■□□□ 1.29
PDF-201ENST00000288022 THAP1Q9NVV9 213 aa23.13■■□□□ 1.29
PDF-201ENST00000288022 TUBA8Q9NY65 449 aaPredicted RBP23.13■■□□□ 1.29
PDF-201ENST00000288022 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.13■■□□□ 1.29
PDF-201ENST00000288022 RP1L1Q8IWN7 2480 aaPredicted RBP23.13■■□□□ 1.29
PDF-201ENST00000288022 SVILO95425 2214 aa23.12■■□□□ 1.29
PDF-201ENST00000288022 A0A087WV62 115 aa23.12■■□□□ 1.29
PDF-201ENST00000288022 SCAMP2O15127 329 aaKnown RBP23.12■■□□□ 1.29
PDF-201ENST00000288022 LRRTM2O43300 516 aa23.12■■□□□ 1.29
PDF-201ENST00000288022 PPM1BO75688 479 aa23.12■■□□□ 1.29
PDF-201ENST00000288022 MANFP55145 182 aaKnown RBP23.12■■□□□ 1.29
PDF-201ENST00000288022 RPP38P78345 283 aaKnown RBP23.12■■□□□ 1.29
PDF-201ENST00000288022 HSF1Q00613 529 aa23.12■■□□□ 1.29
PDF-201ENST00000288022 EMX2Q04743 252 aa23.12■■□□□ 1.29
PDF-201ENST00000288022 C1QL3Q5VWW1 255 aa23.12■■□□□ 1.29
PDF-201ENST00000288022 ELP4Q96EB1 424 aa23.12■■□□□ 1.29
PDF-201ENST00000288022 MANSC1Q9H8J5 431 aa23.12■■□□□ 1.29
PDF-201ENST00000288022 AKTIPQ9H8T0 292 aa23.12■■□□□ 1.29
PDF-201ENST00000288022 IL1RL2Q9HB29 575 aa23.12■■□□□ 1.29
PDF-201ENST00000288022 NOP53Q9NZM5 478 aaKnown RBP23.12■■□□□ 1.29
PDF-201ENST00000288022 ERRFI1Q9UJM3 462 aaPredicted RBP23.12■■□□□ 1.29
PDF-201ENST00000288022 CNOT11Q9UKZ1 510 aaKnown RBP23.12■■□□□ 1.29
PDF-201ENST00000288022 C19orf53Q9UNZ5 99 aaPredicted RBP23.12■■□□□ 1.29
PDF-201ENST00000288022 GPR55Q9Y2T6 319 aaPredicted RBP23.12■■□□□ 1.29
PDF-201ENST00000288022 EML6Q6ZMW3 1958 aa23.11■■□□□ 1.29
PDF-201ENST00000288022 TRGV8A0A0C4DH27 118 aa23.11■■□□□ 1.29
PDF-201ENST00000288022 PLOD2O00469 737 aa23.11■■□□□ 1.29
PDF-201ENST00000288022 STSP08842 583 aa23.11■■□□□ 1.29
PDF-201ENST00000288022 NAGAP17050 411 aa23.11■■□□□ 1.29
PDF-201ENST00000288022 CORO7P57737 925 aa23.11■■□□□ 1.29
PDF-201ENST00000288022 C4orf17Q53FE4 359 aa23.11■■□□□ 1.29
PDF-201ENST00000288022 TTMPQ5BVD1 217 aa23.11■■□□□ 1.29
PDF-201ENST00000288022 BNC2Q6ZN30 1099 aaPredicted RBP23.11■■□□□ 1.29
PDF-201ENST00000288022 RGS9BPQ6ZS82 235 aa23.11■■□□□ 1.29
PDF-201ENST00000288022 SLC34A3Q8N130 599 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms