RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 C6orf47O95873 294 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 VIMP08670 466 aaKnown RBP6.03□□□□□ -1.44
CD44-204ENST00000279452 CCL3P10147 92 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 LAMP1P11279 417 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 GNLYP22749 145 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 ABCD3P28288 659 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 PIGAP37287 484 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 KIR3DL1P43629 444 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 UQCRFS1P47985 274 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 MASP1P48740 699 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 DNASE1L1P49184 302 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 CLNS1AP54105 237 aaKnown RBP6.03□□□□□ -1.44
CD44-204ENST00000279452 AQP5P55064 265 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 CLDN8P56748 225 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 CORO7P57737 925 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 FBXW4P57775 412 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 RPP38P78345 283 aaKnown RBP6.03□□□□□ -1.44
CD44-204ENST00000279452 FOXK1P85037 733 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 PRR5P85299 388 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 MGAT2Q10469 447 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 SF3A3Q12874 501 aaKnown RBP eCLIP6.03□□□□□ -1.44
CD44-204ENST00000279452 DUSP8Q13202 625 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 MRPL49Q13405 166 aaKnown RBP6.03□□□□□ -1.44
CD44-204ENST00000279452 PDE7AQ13946 482 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 TOMM20Q15388 145 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 CEBPEQ15744 281 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 SMU1Q2TAY7 513 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 LSM12Q3MHD2 195 aaKnown RBP6.03□□□□□ -1.44
CD44-204ENST00000279452 SLC22A10Q63ZE4 541 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 OR4F3Q6IEY1 312 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 ANGPTL8Q6UXH0 198 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 GFRALQ6UXV0 394 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 GK5Q6ZS86 529 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 SPATA19Q7Z5L4 167 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 WDR53Q7Z5U6 358 aaPredicted RBP6.03□□□□□ -1.44
CD44-204ENST00000279452 ANKRD46Q86W74 232 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 SULF2Q8IWU5 870 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 ARMC10Q8N2F6 343 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 SLC15A4Q8N697 577 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 OR10G3Q8NGC4 313 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 OR4A15Q8NGL6 344 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 OR5AK3PQ8NH89 298 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 PRR7Q8TB68 274 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.03□□□□□ -1.44
CD44-204ENST00000279452 NUDT8Q8WV74 236 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 FAR1Q8WVX9 515 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 CKAP2Q8WWK9 683 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 SLC9A6Q92581 669 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 TP53INP1Q96A56 240 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 MIB2Q96AX9 1013 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 ERP27Q96DN0 273 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 OMA1Q96E52 524 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 ELP4Q96EB1 424 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 OTUB1Q96FW1 271 aaPredicted RBP6.03□□□□□ -1.44
CD44-204ENST00000279452 SCMH1Q96GD3 660 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 LCORQ96JN0 433 aaPredicted RBP6.03□□□□□ -1.44
CD44-204ENST00000279452 RILPQ96NA2 401 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 MS4A4EQ96PG1 132 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 OR52B2Q96RD2 323 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 TAAR6Q96RI8 345 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 YIPF4Q9BSR8 244 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 DOHHQ9BU89 302 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 BHLHE41Q9C0J9 482 aaPredicted RBP6.03□□□□□ -1.44
CD44-204ENST00000279452 NXF5Q9H1B4 397 aaKnown RBP6.03□□□□□ -1.44
CD44-204ENST00000279452 EXO5Q9H790 373 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 METTL7AQ9H8H3 244 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 Q9N2J8 555 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 NPHS2Q9NP85 383 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 ZCCHC3Q9NUD5 404 aaKnown RBP6.03□□□□□ -1.44
CD44-204ENST00000279452 AIG1Q9NVV5 245 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 ASIC5Q9NY37 505 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 TAS2R7Q9NYW3 318 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 KLRF1Q9NZS2 232 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 SEC14L3Q9UDX4 400 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 ATP6V1HQ9UI12 483 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 SH3BGRL2Q9UJC5 107 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 PCDHGB4Q9UN71 923 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 NPIPA1Q9UND3 350 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 MAPRE3Q9UPY8 281 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 NPFFR2Q9Y5X5 522 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 CCDC88CQ9P219 2028 aa6.03□□□□□ -1.44
CD44-204ENST00000279452 A0A087WV62 115 aa6.02□□□□□ -1.45
CD44-204ENST00000279452 A0A0G2JMM0 328 aa6.02□□□□□ -1.45
CD44-204ENST00000279452 A0A0G2JND7 137 aa6.02□□□□□ -1.45
CD44-204ENST00000279452 A0A1W2PPB8 328 aa6.02□□□□□ -1.45
CD44-204ENST00000279452 A0A1W2PRS3 328 aa6.02□□□□□ -1.45
CD44-204ENST00000279452 ANKUB1A6NFN9 424 aa6.02□□□□□ -1.45
CD44-204ENST00000279452 KIR3DP1A8MWS1 328 aa6.02□□□□□ -1.45
CD44-204ENST00000279452 UPK1AO00322 258 aa6.02□□□□□ -1.45
CD44-204ENST00000279452 CDK2AP1O14519 115 aa6.02□□□□□ -1.45
CD44-204ENST00000279452 ACOX3O15254 700 aa6.02□□□□□ -1.45
CD44-204ENST00000279452 EMC8O43402 210 aa6.02□□□□□ -1.45
CD44-204ENST00000279452 HS6ST1O60243 411 aa6.02□□□□□ -1.45
CD44-204ENST00000279452 PLOD3O60568 738 aa6.02□□□□□ -1.45
CD44-204ENST00000279452 ZNF354AO60765 605 aaPredicted RBP6.02□□□□□ -1.45
CD44-204ENST00000279452 TBX19O60806 448 aa6.02□□□□□ -1.45
CD44-204ENST00000279452 PPM1BO75688 479 aa6.02□□□□□ -1.45
CD44-204ENST00000279452 UNC5CO95185 931 aa6.02□□□□□ -1.45
CD44-204ENST00000279452 KCNH1O95259 989 aa6.02□□□□□ -1.45
CD44-204ENST00000279452 WISP1O95388 367 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms