RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 STT3AP46977 705 aa16.84■□□□□ 0.29
CAPN1-201ENST00000279247 CCR5P51681 352 aa16.84■□□□□ 0.29
CAPN1-201ENST00000279247 TARDBPQ13148 414 aaKnown RBP eCLIP16.84■□□□□ 0.29
CAPN1-201ENST00000279247 MLC1Q15049 377 aa16.84■□□□□ 0.29
CAPN1-201ENST00000279247 OR56A1Q8NGH5 318 aa16.84■□□□□ 0.29
CAPN1-201ENST00000279247 HRASLS5Q96KN8 279 aa16.84■□□□□ 0.29
CAPN1-201ENST00000279247 C10orf90Q96M02 699 aa16.84■□□□□ 0.29
CAPN1-201ENST00000279247 PILRAQ9UKJ1 303 aa16.84■□□□□ 0.29
CAPN1-201ENST00000279247 FGF17O60258 216 aa16.84■□□□□ 0.29
CAPN1-201ENST00000279247 UGT2B17O75795 530 aa16.84■□□□□ 0.29
CAPN1-201ENST00000279247 CPNE6O95741 557 aa16.84■□□□□ 0.29
CAPN1-201ENST00000279247 CCDC159P0C7I6 412 aa16.84■□□□□ 0.29
CAPN1-201ENST00000279247 TNNI3P19429 210 aa16.84■□□□□ 0.29
CAPN1-201ENST00000279247 TOP3AQ13472 1001 aaPredicted RBP16.84■□□□□ 0.29
CAPN1-201ENST00000279247 EXOSC7Q15024 291 aaKnown RBP16.84■□□□□ 0.29
CAPN1-201ENST00000279247 PTGES3Q15185 160 aaKnown RBP16.84■□□□□ 0.29
CAPN1-201ENST00000279247 ZNF311Q5JNZ3 666 aa16.84■□□□□ 0.29
CAPN1-201ENST00000279247 RNF217Q8TC41 542 aa16.84■□□□□ 0.29
CAPN1-201ENST00000279247 SLC7A13Q8TCU3 470 aa16.84■□□□□ 0.29
CAPN1-201ENST00000279247 SERINC2Q96SA4 455 aa16.84■□□□□ 0.29
CAPN1-201ENST00000279247 FNDC11Q9BVV2 318 aa16.84■□□□□ 0.29
CAPN1-201ENST00000279247 ROGDIQ9GZN7 287 aa16.84■□□□□ 0.29
CAPN1-201ENST00000279247 SLC13A4Q9UKG4 626 aa16.84■□□□□ 0.29
CAPN1-201ENST00000279247 CFAP54Q96N23 3096 aa16.83■□□□□ 0.29
CAPN1-201ENST00000279247 NPIPA5A0A0B4J1W7 369 aa16.83■□□□□ 0.29
CAPN1-201ENST00000279247 NPIPA7E9PJI5 369 aa16.83■□□□□ 0.29
CAPN1-201ENST00000279247 NPIPA8P0DM63 369 aa16.83■□□□□ 0.29
CAPN1-201ENST00000279247 PDX1P52945 283 aa16.83■□□□□ 0.29
CAPN1-201ENST00000279247 HPCAP84074 193 aa16.83■□□□□ 0.29
CAPN1-201ENST00000279247 ERV3-1Q14264 604 aa16.83■□□□□ 0.29
CAPN1-201ENST00000279247 ZC3H14Q6PJT7 736 aaKnown RBP16.83■□□□□ 0.29
CAPN1-201ENST00000279247 ERI1Q8IV48 349 aaKnown RBP16.83■□□□□ 0.29
CAPN1-201ENST00000279247 APOBEC4Q8WW27 367 aaKnown RBP16.83■□□□□ 0.29
CAPN1-201ENST00000279247 HSPA12BQ96MM6 686 aa16.83■□□□□ 0.29
CAPN1-201ENST00000279247 GPR55Q9Y2T6 319 aaPredicted RBP16.83■□□□□ 0.29
CAPN1-201ENST00000279247 GPC6Q9Y625 555 aaPredicted RBP16.83■□□□□ 0.29
CAPN1-201ENST00000279247 LRP4O75096 1905 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 KIR2DS5A0A0G2JLQ3 304 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 A0A0G2JNG1 304 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 SYNDIG1LA6NDD5 238 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 OR5K3A6NET4 321 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 CPSF4LA6NMK7 179 aaKnown RBP16.83■□□□□ 0.28
CAPN1-201ENST00000279247 KIR2DS3K7RE56 304 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 ELAVL4P26378 380 aaKnown RBP16.83■□□□□ 0.28
CAPN1-201ENST00000279247 ELOAQ14241 798 aaKnown RBP16.83■□□□□ 0.28
CAPN1-201ENST00000279247 KIR2DS5Q14953 304 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 GPR68Q15743 365 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 RORBQ92753 470 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 TM4SF19Q96DZ7 209 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 MAP3K3Q99759 626 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 FUNDC2Q9BWH2 189 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 GPR83Q9NYM4 423 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 HCN3Q9P1Z3 774 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 PCDHGA10Q9Y5H3 936 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 A0A0A6YYC8 382 aaPredicted RBP16.83■□□□□ 0.28
CAPN1-201ENST00000279247 I3L1I5 382 aaPredicted RBP16.83■□□□□ 0.28
CAPN1-201ENST00000279247 EPPINO95925 133 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 LCKP06239 509 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 MASP1P48740 699 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 CSNK1EP49674 416 aaKnown RBP16.83■□□□□ 0.28
CAPN1-201ENST00000279247 BLKP51451 505 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 SLC35A2P78381 396 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 FZD5Q13467 585 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 ATAD3BQ5T9A4 648 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 ZNF605Q86T29 641 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 NT5CQ8TCD5 201 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 THAP11Q96EK4 314 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 SLC35A4Q96G79 324 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 ORAI3Q9BRQ5 295 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 GIN1Q9NXP7 522 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 PHF11Q9UIL8 331 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 SLC9A8Q9Y2E8 581 aa16.83■□□□□ 0.28
CAPN1-201ENST00000279247 TNFSF14O43557 240 aa16.82■□□□□ 0.28
CAPN1-201ENST00000279247 RGS10O43665 173 aa16.82■□□□□ 0.28
CAPN1-201ENST00000279247 MYF5P13349 255 aa16.82■□□□□ 0.28
CAPN1-201ENST00000279247 CHMP24386 653 aa16.82■□□□□ 0.28
CAPN1-201ENST00000279247 CD38P28907 300 aa16.82■□□□□ 0.28
CAPN1-201ENST00000279247 CNR2P34972 360 aa16.82■□□□□ 0.28
CAPN1-201ENST00000279247 GGT2P36268 569 aa16.82■□□□□ 0.28
CAPN1-201ENST00000279247 GP2P55259 537 aaKnown RBP16.82■□□□□ 0.28
CAPN1-201ENST00000279247 MAT1AQ00266 395 aaKnown RBP16.82■□□□□ 0.28
CAPN1-201ENST00000279247 BNIP3Q12983 259 aa16.82■□□□□ 0.28
CAPN1-201ENST00000279247 NKAIN2Q5VXU1 208 aa16.82■□□□□ 0.28
CAPN1-201ENST00000279247 IQCF1Q8N6M8 205 aa16.82■□□□□ 0.28
CAPN1-201ENST00000279247 GABARAPL3Q9BY60 117 aa16.82■□□□□ 0.28
CAPN1-201ENST00000279247 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.82■□□□□ 0.28
CAPN1-201ENST00000279247 PROX2Q3B8N5 592 aa16.82■□□□□ 0.28
CAPN1-201ENST00000279247 PIK3R3Q92569 461 aa16.82■□□□□ 0.28
CAPN1-201ENST00000279247 COPS4Q9BT78 406 aa16.82■□□□□ 0.28
CAPN1-201ENST00000279247 SLC38A1Q9H2H9 487 aa16.82■□□□□ 0.28
CAPN1-201ENST00000279247 SLC2A4RGQ9NR83 387 aa16.82■□□□□ 0.28
CAPN1-201ENST00000279247 ZSCAN32Q9NX65 697 aa16.82■□□□□ 0.28
CAPN1-201ENST00000279247 TAS2R16Q9NYV7 291 aa16.82■□□□□ 0.28
CAPN1-201ENST00000279247 CASC3O15234 703 aaKnown RBP16.81■□□□□ 0.28
CAPN1-201ENST00000279247 CPMP14384 443 aa16.81■□□□□ 0.28
CAPN1-201ENST00000279247 TSFMP43897 325 aaKnown RBP16.81■□□□□ 0.28
CAPN1-201ENST00000279247 GABARAPL2P60520 117 aa16.81■□□□□ 0.28
CAPN1-201ENST00000279247 SYT16Q17RD7 645 aa16.81■□□□□ 0.28
CAPN1-201ENST00000279247 TMEM64Q6YI46 380 aa16.81■□□□□ 0.28
CAPN1-201ENST00000279247 BCDIN3DQ7Z5W3 292 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms