RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 ZNF551Q7Z340 670 aaPredicted RBP8.73□□□□□ -1.01
PDGFC-201ENST00000274071 CMIPQ8IY22 773 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 ARMC10Q8N2F6 343 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 TMEM185AQ8NFB2 350 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 OR10J5Q8NHC4 309 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 TMEM176AQ96HP8 235 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 EPYCQ99645 322 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 TMPRSS13Q9BYE2 586 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 MRPL37Q9BZE1 423 aaKnown RBP8.73□□□□□ -1.01
PDGFC-201ENST00000274071 JPH1Q9HDC5 661 aaPredicted RBP8.73□□□□□ -1.01
PDGFC-201ENST00000274071 KLHL1Q9NR64 748 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 ACSL6Q9UKU0 697 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 WASF3Q9UPY6 502 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 TRBV5-3A0A0A0MS03 114 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 A0A1B0GVC2 190 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 ABHD14A-ACY1A0A1B0GW23 586 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 BTBD17A6NE02 478 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 A6NIN4 97 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 ZNF593O00488 134 aaPredicted RBP8.73□□□□□ -1.01
PDGFC-201ENST00000274071 KHDRBS3O75525 346 aaKnown RBP8.73□□□□□ -1.01
PDGFC-201ENST00000274071 MED6O75586 246 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 SNAPC5O75971 98 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 IGHV2-5P01817 119 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 PIPP12273 146 aaPredicted RBP8.73□□□□□ -1.01
PDGFC-201ENST00000274071 DRD5P21918 477 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 GNG10P50151 68 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 CDH4P55283 916 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 RAG2P55895 527 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 UBE2IP63279 158 aaKnown RBP8.73□□□□□ -1.01
PDGFC-201ENST00000274071 SLC6A3Q01959 620 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 CLINT1Q14677 625 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 PTGR1Q14914 329 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 DUOXA2Q1HG44 320 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 RFTN2Q52LD8 501 aaPredicted RBP8.73□□□□□ -1.01
PDGFC-201ENST00000274071 SGO1Q5FBB7 561 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 OR5M10Q6IEU7 315 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 ZNF852Q6ZMS4 543 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 PTCHD4Q6ZW05 846 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 SLC29A4Q7RTT9 530 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 TSPAN33Q86UF1 283 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 MEIOBQ8N635 442 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 RPLP0P6Q8NHW5 317 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 ZC3H10Q96K80 434 aaKnown RBP8.73□□□□□ -1.01
PDGFC-201ENST00000274071 FICDQ9BVA6 458 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 POLR1EQ9GZS1 481 aaKnown RBP8.73□□□□□ -1.01
PDGFC-201ENST00000274071 TMPRSS4Q9NRS4 437 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 CA10Q9NS85 328 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 RNF181Q9P0P0 153 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 NFKBIL1Q9UBC1 381 aaPredicted RBP8.73□□□□□ -1.01
PDGFC-201ENST00000274071 OR10H1Q9Y4A9 318 aa8.73□□□□□ -1.01
PDGFC-201ENST00000274071 A0A1B0GW55 424 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 H7C0S8 307 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 PPIHO43447 177 aaKnown RBP8.72□□□□□ -1.01
PDGFC-201ENST00000274071 ENTPD6O75354 484 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 LATS1O95835 1130 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 EDN1P05305 212 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 PFKMP08237 780 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 DUX4L2P0CJ85 424 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 DUX4L3P0CJ86 424 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 DUX4L4P0CJ87 422 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 DUX4L5P0CJ88 424 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 DUX4L6P0CJ89 424 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 DUX4L7P0CJ90 424 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 ABCD3P28288 659 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 RPS25P62851 125 aaKnown RBP8.72□□□□□ -1.01
PDGFC-201ENST00000274071 PURAQ00577 322 aaKnown RBP8.72□□□□□ -1.01
PDGFC-201ENST00000274071 IL10RBQ08334 325 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 KRT33BQ14525 404 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 PTGES3Q15185 160 aaKnown RBP8.72□□□□□ -1.01
PDGFC-201ENST00000274071 PYY3Q5JQD4 70 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 SPANXN4Q5MJ08 99 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 OVOS1Q6IE37 1185 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 LCLAT1Q6UWP7 414 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 USP30Q70CQ3 517 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 PROKR2Q8NFJ6 384 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 HSH2DQ96JZ2 352 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 C11orf84Q9BUA3 381 aaPredicted RBP8.72□□□□□ -1.01
PDGFC-201ENST00000274071 TRIM62Q9BVG3 475 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 TLNRD1Q9H1K6 362 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 DUSP15Q9H1R2 295 aaPredicted RBP8.72□□□□□ -1.01
PDGFC-201ENST00000274071 PRDM13Q9H4Q3 707 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 SLC25A19Q9HC21 320 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 NPDC1Q9NQX5 325 aaPredicted RBP8.72□□□□□ -1.01
PDGFC-201ENST00000274071 CLN6Q9NWW5 311 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 DUX4Q9UBX2 424 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 NEU3Q9UQ49 428 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 ASB1Q9Y576 335 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 MARCH11A6NNE9 402 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 ZNF197O14709 1029 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 SCAMP2O15127 329 aaKnown RBP8.72□□□□□ -1.01
PDGFC-201ENST00000274071 MID1O15344 667 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 PRKAR2AP13861 404 aaKnown RBP8.72□□□□□ -1.01
PDGFC-201ENST00000274071 NQO2P16083 231 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 CPEP16870 476 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 CNR1P21554 472 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 CSF2RBP32927 897 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 SURF1Q15526 300 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 FAM187BQ17R55 369 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 PLK5Q496M5 336 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 CASP12Q6UXS9 341 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms