RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 XCR1P46094 333 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 BTG2P78543 158 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 PPP2R2BQ00005 443 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 ACY1Q03154 408 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 BIKQ13323 160 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 DSG2Q14126 1118 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 ERV3-1Q14264 604 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 OTUD3Q5T2D3 398 aaPredicted RBP15.29■□□□□ 0.04
TPM1-201ENST00000267996 ZC3H14Q6PJT7 736 aaKnown RBP15.29■□□□□ 0.04
TPM1-201ENST00000267996 KRT73Q86Y46 540 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 SLC16A11Q8NCK7 471 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 ADAMTS15Q8TE58 950 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 RASSF5Q8WWW0 418 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 COL21A1Q96P44 957 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 OR1F2PQ96R84 312 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 ZNF300Q96RE9 604 aaPredicted RBP15.29■□□□□ 0.04
TPM1-201ENST00000267996 ZNF347Q96SE7 839 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 GABARAPL1Q9H0R8 117 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 SLC38A1Q9H2H9 487 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 EXD2Q9NVH0 621 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 CALML5Q9NZT1 146 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 CCDC88CQ9P219 2028 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 VPS13AQ96RL7 3174 aa15.29■□□□□ 0.04
TPM1-201ENST00000267996 NME6O75414 186 aaPredicted RBP15.28■□□□□ 0.04
TPM1-201ENST00000267996 E2F6O75461 281 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 CBX7O95931 251 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 FESP07332 822 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 TNFRSF1BP20333 461 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 FPR1P21462 350 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 DNAJA1P31689 397 aaKnown RBP15.28■□□□□ 0.04
TPM1-201ENST00000267996 GALNSP34059 522 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 STT3AP46977 705 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 OR1D4P47884 311 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 DAB2P98082 770 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 KCNC4Q03721 635 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 STX4Q12846 297 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 PUM1Q14671 1186 aaKnown RBP eCLIP15.28■□□□□ 0.045e-9■□□□□ 8.1
TPM1-201ENST00000267996 DUSP5Q16690 384 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 ATAD3BQ5T9A4 648 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 PRAMEF17Q5VTA0 474 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 CHERPQ8IWX8 916 aaKnown RBP15.28■□□□□ 0.04
TPM1-201ENST00000267996 HS3ST5Q8IZT8 346 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 VWA5B2Q8N398 1253 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 MAGEE2Q8TD90 523 aaPredicted RBP15.28■□□□□ 0.04
TPM1-201ENST00000267996 SDCCAG3Q96C92 435 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 RDH12Q96NR8 316 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 SPATA5L1Q9BVQ7 753 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 ALOXE3Q9BYJ1 711 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 PIGUQ9H490 435 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 SMPD3Q9NY59 655 aaPredicted RBP15.28■□□□□ 0.04
TPM1-201ENST00000267996 IFT80Q9P2H3 777 aaPredicted RBP15.28■□□□□ 0.04
TPM1-201ENST00000267996 DHCR7Q9UBM7 475 aaKnown RBP15.28■□□□□ 0.04
TPM1-201ENST00000267996 MMACHCQ9Y4U1 282 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 MAU2Q9Y6X3 613 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 ENPP4Q9Y6X5 453 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 GPR179Q6PRD1 2367 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 A0A0C4DFX4 3053 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 A0A1B0GX78 115 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 NTN3O00634 580 aaPredicted RBP15.28■□□□□ 0.04
TPM1-201ENST00000267996 GALR2O43603 387 aaPredicted RBP15.28■□□□□ 0.04
TPM1-201ENST00000267996 H6PDO95479 791 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 ITGA2P17301 1181 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 ALAS2P22557 587 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 OR1E2P47887 323 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 PPP1R8Q12972 351 aaKnown RBP15.28■□□□□ 0.04
TPM1-201ENST00000267996 DUSP8Q13202 625 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 SERTAD2Q14140 314 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 PDK3Q15120 406 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 ARHGAP11BQ3KRB8 267 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 TCEAL6Q6IPX3 200 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 WDR53Q7Z5U6 358 aaPredicted RBP15.28■□□□□ 0.04
TPM1-201ENST00000267996 SLITRK4Q8IW52 837 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 GALNT12Q8IXK2 581 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 CDRT4Q8N9R6 151 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 CHDHQ8NE62 594 aaPredicted RBP15.28■□□□□ 0.04
TPM1-201ENST00000267996 DOK4Q8TEW6 326 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.28■□□□□ 0.04
TPM1-201ENST00000267996 TCEAL3Q969E4 200 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 ZNF354BQ96LW1 612 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 CCDC74BQ96LY2 380 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 STACQ99469 402 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 EPYCQ99645 322 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 RBM4BQ9BQ04 359 aaKnown RBP15.28■□□□□ 0.04
TPM1-201ENST00000267996 RBM4Q9BWF3 364 aaKnown RBP15.28■□□□□ 0.04
TPM1-201ENST00000267996 AMBRA1Q9C0C7 1298 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 ADAP2Q9NPF8 381 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 DUSP22Q9NRW4 184 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 SIDT1Q9NXL6 827 aaKnown RBP15.28■□□□□ 0.04
TPM1-201ENST00000267996 SEC14L3Q9UDX4 400 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 NDOR1Q9UHB4 597 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 SRPK3Q9UPE1 567 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 PCDHGB3Q9Y5G1 929 aa15.28■□□□□ 0.04
TPM1-201ENST00000267996 JRKO75564 520 aa15.27■□□□□ 0.03
TPM1-201ENST00000267996 CDC123O75794 336 aaPredicted RBP15.27■□□□□ 0.03
TPM1-201ENST00000267996 ZIC2O95409 532 aaPredicted RBP15.27■□□□□ 0.03
TPM1-201ENST00000267996 GRK6P43250 576 aa15.27■□□□□ 0.03
TPM1-201ENST00000267996 MERTKQ12866 999 aa15.27■□□□□ 0.03
TPM1-201ENST00000267996 EXOSC7Q15024 291 aaKnown RBP15.27■□□□□ 0.03
TPM1-201ENST00000267996 GPAT3Q53EU6 434 aa15.27■□□□□ 0.03
TPM1-201ENST00000267996 AP1ARQ63HQ0 302 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms