RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 PRODH2Q9UF12 536 aa13.24□□□□□ -0.29
SSBP1-201ENST00000265304 TUBD1Q9UJT1 453 aa13.24□□□□□ -0.29
SSBP1-201ENST00000265304 LEF1Q9UJU2 399 aaPredicted RBP13.24□□□□□ -0.29
SSBP1-201ENST00000265304 PCDHGB4Q9UN71 923 aa13.24□□□□□ -0.29
SSBP1-201ENST00000265304 GPR55Q9Y2T6 319 aaPredicted RBP13.24□□□□□ -0.29
SSBP1-201ENST00000265304 NDUFAF1Q9Y375 327 aa13.24□□□□□ -0.29
SSBP1-201ENST00000265304 PCDHGB7Q9Y5F8 929 aa13.24□□□□□ -0.29
SSBP1-201ENST00000265304 HEMK1Q9Y5R4 338 aaPredicted RBP13.24□□□□□ -0.29
SSBP1-201ENST00000265304 NBEAQ8NFP9 2946 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 PRRC2CQ9Y520 2896 aaKnown RBP13.23□□□□□ -0.29
SSBP1-201ENST00000265304 MASP2O00187 686 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 PRKNO60260 465 aaPredicted RBP13.23□□□□□ -0.29
SSBP1-201ENST00000265304 COQ9O75208 318 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 ABCB1P08183 1280 aaPredicted RBP13.23□□□□□ -0.29
SSBP1-201ENST00000265304 CELA2AP08217 269 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 CT45A8P0DMV1 189 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 CT45A9P0DMV2 189 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 TRHRP34981 398 aaPredicted RBP13.23□□□□□ -0.29
SSBP1-201ENST00000265304 MAN2A2P49641 1150 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 PGDP52209 483 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 MLF1P58340 268 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 PRR5P85299 388 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 STX5Q13190 355 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 KRT72Q14CN4 511 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 CT45A2Q5DJT8 189 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 CRB2Q5IJ48 1285 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 C6orf163Q5TEZ5 329 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 SAXO2Q658L1 398 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 BHLHB9Q6PI77 547 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 TMEM107Q6UX40 140 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 IGFL3Q6UXB1 125 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 GK5Q6ZS86 529 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 GPR155Q7Z3F1 870 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 ANKRD46Q86W74 232 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 KIF2BQ8N4N8 673 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 SLC15A4Q8N697 577 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 FITM2Q8N6M3 262 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 OR56A1Q8NGH5 318 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 TTC9Q92623 222 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 THOC3Q96J01 351 aaKnown RBP13.23□□□□□ -0.29
SSBP1-201ENST00000265304 CNPPD1Q9BV87 410 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 DEFB126Q9BYW3 111 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 WWTR1Q9GZV5 400 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 SLC6A13Q9NSD5 602 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 ARMCX1Q9P291 453 aa13.23□□□□□ -0.29
SSBP1-201ENST00000265304 TRBV11-1A0A0K0K1C0 115 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 RFXANKO14593 260 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 ACOX3O15254 700 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 NKX2-2O95096 273 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 GUSBP08236 651 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 COX4I1P13073 169 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 NAGAP17050 411 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 EFNA1P20827 205 aaPredicted RBP13.22□□□□□ -0.29
SSBP1-201ENST00000265304 PTGER1P34995 402 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 CDKN2CP42773 168 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 MVDP53602 400 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 CXADRP78310 365 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 PSG6Q00889 435 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 CYLC2Q14093 348 aaPredicted RBP13.22□□□□□ -0.29
SSBP1-201ENST00000265304 EXOSC7Q15024 291 aaKnown RBP13.22□□□□□ -0.29
SSBP1-201ENST00000265304 PIGGQ5H8A4 983 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 MFSD12Q6NUT3 480 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 SLC2A7Q6PXP3 512 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 RPS19BP1Q86WX3 136 aaKnown RBP13.22□□□□□ -0.29
SSBP1-201ENST00000265304 HPS6Q86YV9 775 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 MSRB3Q8IXL7 192 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 SLC5A8Q8N695 610 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 TRIML2Q8N7C3 387 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 NUP43Q8NFH3 380 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 OR52R1Q8NGF1 315 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 ZFP90Q8TF47 636 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 HSPBAP1Q96EW2 488 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 WBP1Q96G27 269 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 ZNF354BQ96LW1 612 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 MS4A4EQ96PG1 132 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 PANX1Q96RD7 426 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 ADNPQ9H2P0 1102 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 DDX18Q9NVP1 670 aaKnown RBP13.22□□□□□ -0.29
SSBP1-201ENST00000265304 SLC25A37Q9NYZ2 338 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 SLAMF8Q9P0V8 285 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 VPS4AQ9UN37 437 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 PCDHB14Q9Y5E9 798 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 CHD6Q8TD26 2715 aa13.22□□□□□ -0.29
SSBP1-201ENST00000265304 C2orf92A0A1B0GVN3 265 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 NR5A2O00482 541 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 NADKO95544 446 aaPredicted RBP13.21□□□□□ -0.29
SSBP1-201ENST00000265304 HMGN2P05204 90 aaKnown RBP13.21□□□□□ -0.29
SSBP1-201ENST00000265304 BMP2P12643 396 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 GPC1P35052 558 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 RHDQ02161 417 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 GAB1Q13480 694 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 MEP1AQ16819 746 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 LINC00303Q3SY05 128 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 ACER2Q5QJU3 275 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 TCTN3Q6NUS6 607 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 C8orf82Q6P1X6 216 aaPredicted RBP13.21□□□□□ -0.29
SSBP1-201ENST00000265304 LYPD8Q6UX82 237 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 ISLR2Q6UXK2 745 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 HACD2Q6Y1H2 254 aa13.21□□□□□ -0.29
SSBP1-201ENST00000265304 SLC29A4Q7RTT9 530 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms