RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 EDARQ9UNE0 448 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 CORINQ9Y5Q5 1042 aa15.42■□□□□ 0.06
CTCF-201ENST00000264010 URB1O60287 2271 aaKnown RBP15.42■□□□□ 0.06
CTCF-201ENST00000264010 DUXAA6NLW8 204 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 LCKP06239 509 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 STSP08842 583 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 AKT2P31751 481 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 OPRD1P41143 372 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 POU6F2P78424 691 aaPredicted RBP15.41■□□□□ 0.06
CTCF-201ENST00000264010 NDUFA9Q16795 377 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 CHIAQ9BZP6 476 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 KLHL31Q9H511 634 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 ACOT13Q9NPJ3 140 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 PCDH17O14917 1159 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 RAB30Q15771 203 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 ZNF614Q8N883 585 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 OR2L8Q8NGY9 312 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 ZNF675Q8TD23 568 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 KLHL6Q8WZ60 621 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 PRDM8Q9NQV8 689 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 NUFIP1Q9UHK0 495 aaKnown RBP15.41■□□□□ 0.06
CTCF-201ENST00000264010 PLCL2Q9UPR0 1127 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 CLCA3PQ9Y6N3 262 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 J3KTA2 159 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 AXIN1O15169 862 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 TOXO94900 526 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 FHP07954 510 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 SOX9P48436 509 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 CSNK1G2P78368 415 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 BNC1Q01954 994 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 PDE7AQ13946 482 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 ZNF311Q5JNZ3 666 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 FAHD1Q6P587 224 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 Q6ZPB1 254 aaPredicted RBP15.41■□□□□ 0.06
CTCF-201ENST00000264010 CDK20Q8IZL9 346 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 SLC38A5Q8WUX1 472 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 NKX2-4Q9H2Z4 354 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 DUSP21Q9H596 190 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 SIRT5Q9NXA8 310 aa15.41■□□□□ 0.06
CTCF-201ENST00000264010 CRNNQ9UBG3 495 aaPredicted RBP15.41■□□□□ 0.06
CTCF-201ENST00000264010 PRAMEF33A0A0G2JMD5 474 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 A0A1B0GW55 424 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 B3GALT2O43825 422 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 PRAMEF10O60809 474 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 DUX4L2P0CJ85 424 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 DUX4L3P0CJ86 424 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 DUX4L4P0CJ87 422 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 DUX4L5P0CJ88 424 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 DUX4L6P0CJ89 424 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 DUX4L7P0CJ90 424 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 NR2F6P10588 404 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 SLC35A2P78381 396 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 LARS2Q15031 903 aaKnown RBP15.4■□□□□ 0.06
CTCF-201ENST00000264010 SPRED2Q7Z698 418 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 MMP21Q8N119 569 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 EFHD2Q96C19 240 aaPredicted RBP15.4■□□□□ 0.06
CTCF-201ENST00000264010 C7orf34Q96L11 122 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 WDR92Q96MX6 357 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 GINS4Q9BRT9 223 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 RSPH9Q9H1X1 276 aaPredicted RBP15.4■□□□□ 0.06
CTCF-201ENST00000264010 BEX1Q9HBH7 125 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 WASH6PQ9NQA3 447 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 SNTG1Q9NSN8 517 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 DUX4Q9UBX2 424 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 POLHQ9Y253 713 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 SOD1P00441 154 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 JUNDP17535 347 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 MESP2Q0VG99 397 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 SPCS2Q15005 226 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 GPR68Q15743 365 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 CHPT1Q8WUD6 406 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 KCNK12Q9HB15 430 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 PHF11Q9UIL8 331 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 ANAPC1Q9H1A4 1944 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 IRGMA1A4Y4 181 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 EMC8O43402 210 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 DPM1O60762 260 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 GSTM3P21266 225 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 SCRN3Q0VDG4 424 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 MZT2BQ6NZ67 158 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 PGBD2Q6P3X8 592 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 NRROSQ86YC3 692 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.4■□□□□ 0.064e-7■■■■■ 32.7
CTCF-201ENST00000264010 MKRN2Q9H000 416 aaKnown RBP15.4■□□□□ 0.06
CTCF-201ENST00000264010 ANKHQ9HCJ1 492 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 PAK1IP1Q9NWT1 392 aaPredicted RBP15.4■□□□□ 0.06
CTCF-201ENST00000264010 GPR83Q9NYM4 423 aa15.4■□□□□ 0.06
CTCF-201ENST00000264010 SH3D21A4FU49 640 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 STMND1H3BQB6 276 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 IL32P24001 234 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 TALDO1P37837 337 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 SCN1BQ07699 218 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 ENTHD1Q8IYW4 607 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 SUN3Q8TAQ9 357 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 PIGXQ8TBF5 258 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 COX14Q96I36 57 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 A4GALTQ9NPC4 353 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 TEX10Q9NXF1 929 aaPredicted RBP15.39■□□□□ 0.05
CTCF-201ENST00000264010 EIF3KQ9UBQ5 218 aaKnown RBP15.39■□□□□ 0.05
CTCF-201ENST00000264010 LILRB5O75023 590 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms