RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 SLC30A6Q6NXT4 461 aa15.02□□□□□ -0.01
LMNB1-201ENST00000261366 TMEM150AQ86TG1 271 aa15.02□□□□□ -0.01
LMNB1-201ENST00000261366 KLBQ86Z14 1044 aa15.02□□□□□ -0.01
LMNB1-201ENST00000261366 OR11H4Q8NGC9 324 aa15.02□□□□□ -0.01
LMNB1-201ENST00000261366 TMEM163Q8TC26 289 aa15.02□□□□□ -0.01
LMNB1-201ENST00000261366 PDXPQ96GD0 296 aa15.02□□□□□ -0.01
LMNB1-201ENST00000261366 TMEM169Q96HH4 297 aa15.02□□□□□ -0.01
LMNB1-201ENST00000261366 TEFMQ96QE5 360 aaKnown RBP15.02□□□□□ -0.01
LMNB1-201ENST00000261366 TREX2Q9BQ50 279 aaPredicted RBP15.02□□□□□ -0.01
LMNB1-201ENST00000261366 MARVELD1Q9BSK0 173 aa15.02□□□□□ -0.01
LMNB1-201ENST00000261366 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.02□□□□□ -0.016e-9■■■□□ 15.9
LMNB1-201ENST00000261366 ZNF224Q9NZL3 707 aa15.02□□□□□ -0.01
LMNB1-201ENST00000261366 CDH10Q9Y6N8 788 aa15.02□□□□□ -0.01
LMNB1-201ENST00000261366 GLOD5A6NK44 160 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 GABRPO00591 440 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 NR2F1P10589 423 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 RPA4Q13156 261 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 CDONQ4KMG0 1287 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 ZBTB37Q5TC79 503 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 TRMT11Q7Z4G4 463 aaKnown RBP15.01□□□□□ -0.01
LMNB1-201ENST00000261366 KIF18BQ86Y91 864 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 FAM26EQ8N5C1 309 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 DUSP18Q8NEJ0 188 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 BBS1Q8NFJ9 593 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 OR6T1Q8NGN1 323 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 HYLS1Q96M11 299 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 F2RL3Q96RI0 385 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 ZSCAN5AQ9BUG6 496 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 SAP130Q9H0E3 1048 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 ZSCAN32Q9NX65 697 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 KLHL42Q9P2K6 505 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 A4GNTQ9UNA3 340 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 ITM2BQ9Y287 266 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 TET1Q8NFU7 2136 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 SYNDIG1LA6NDD5 238 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 FAM183AA6NL82 134 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 HMGN4O00479 90 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 NPC1O15118 1278 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 SEC14L5O43304 696 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 SOD1P00441 154 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 PDGFAP04085 211 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 CXCL3P19876 107 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 HOXD10P28358 340 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 HLA-FP30511 346 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 SF3A2Q15428 464 aaKnown RBP15.01□□□□□ -0.01
LMNB1-201ENST00000261366 LRRC17Q8N6Y2 441 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 BMPERQ8N8U9 685 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 ANKK1Q8NFD2 765 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 OR56A3Q8NH54 315 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 ZFPM2Q8WW38 1151 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 CAPNS2Q96L46 248 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 ZNF354BQ96LW1 612 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 LYSMD1Q96S90 227 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 POLDIP3Q9BY77 421 aaKnown RBP15.01□□□□□ -0.01
LMNB1-201ENST00000261366 RNF32Q9H0A6 362 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 SLC9A8Q9Y2E8 581 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 AP1M2Q9Y6Q5 423 aa15.01□□□□□ -0.01
LMNB1-201ENST00000261366 SLC22A5O76082 557 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 SELPP16109 830 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 GABRA5P31644 462 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 HIST2H2AA3Q6FI13 130 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 CDH24Q86UP0 819 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 TRAPPC5Q8IUR0 188 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 HOMEZQ8IX15 550 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 ZNF680Q8NEM1 530 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 ARMC5Q96C12 935 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 C1QTNF6Q9BXI9 259 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 PTGFRNQ9P2B2 879 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 PCDHGB7Q9Y5F8 929 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 UNC80Q8N2C7 3258 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 PLXNB3Q9ULL4 1909 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 PRAMEF27A3QJZ7 478 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 ARRDC5A6NEK1 342 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 CDK2AP1O14519 115 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 CHP2O43745 196 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 GREM1O60565 184 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 SLC43A1O75387 559 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 PRKRAO75569 313 aaKnown RBP15□□□□□ -0.01
LMNB1-201ENST00000261366 RFPL3O75679 317 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 SLC2A10O95528 541 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 C1GALT1C1LP0DN25 315 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 TFPIP10646 304 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 CDH11P55287 796 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 PDE7AQ13946 482 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 KCNC3Q14003 757 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 TCTN1Q2MV58 587 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 RAET1GQ6H3X3 334 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 NR2C2APQ86WQ0 139 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 GALNT6Q8NCL4 622 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 OR11H7Q8NGC8 314 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 OR8D4Q8NGM9 314 aa15□□□□□ -0.01
LMNB1-201ENST00000261366 SPRYD4Q8WW59 207 aaPredicted RBP15□□□□□ -0.01
LMNB1-201ENST00000261366 HMX1Q9NP08 348 aaPredicted RBP15□□□□□ -0.01
LMNB1-201ENST00000261366 ZC3H12DA2A288 527 aaKnown RBP14.99□□□□□ -0.01
LMNB1-201ENST00000261366 B8ZZF3 427 aa14.99□□□□□ -0.01
LMNB1-201ENST00000261366 ATG13O75143 517 aa14.99□□□□□ -0.01
LMNB1-201ENST00000261366 OR7A10O76100 309 aa14.99□□□□□ -0.01
LMNB1-201ENST00000261366 ACP2P11117 423 aa14.99□□□□□ -0.01
LMNB1-201ENST00000261366 PCSK2P16519 638 aa14.99□□□□□ -0.01
LMNB1-201ENST00000261366 ATF4P18848 351 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms