RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 NPRL2Q8WTW4 380 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 DDIT4LQ96D03 193 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 ECHDC3Q96DC8 303 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 SAMD11Q96NU1 681 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 LINC00597Q9H2U6 94 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 HCFC1R1Q9NWW0 138 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 STUB1Q9UNE7 303 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 B3GALT1Q9Y5Z6 326 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 NPIPA5A0A0B4J1W7 369 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 NPIPA7E9PJI5 369 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 PPM1BO75688 479 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 HPRP00739 348 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 IFNA2P01563 188 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 H2AFB2P0C5Z0 115 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 NPIPA8P0DM63 369 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 NTSR1P30989 418 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 MAGEA3P43357 314 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 STT3AP46977 705 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 GNMTQ14749 295 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 AWAT2Q6E213 333 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 LARP4Q71RC2 724 aaKnown RBP eCLIP11.51□□□□□ -0.57
COL8A1-201ENST00000261037 TRAPPC6BQ86SZ2 158 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 OR5T1Q8NG75 326 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 MFSD8Q8NHS3 518 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 C7orf43Q8WVR3 580 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 LMF1Q96S06 567 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 LAMB4A4D0S4 1761 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 EEF1E1-BLOC1S5C9J1V9 151 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 P04436 131 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 GGT1P19440 569 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 C5AR1P21730 350 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 GRIN2CQ14957 1233 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 TRAM1Q15629 374 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 USF2Q15853 346 aaPredicted RBP11.51□□□□□ -0.57
COL8A1-201ENST00000261037 GTDC1Q4AE62 458 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 RPL13AP3Q6NVV1 102 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 KBTBD6Q86V97 674 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 NRMQ8IXM6 262 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 OR51L1Q8NGJ5 315 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 ASB15Q8WXK1 588 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 HOXB13Q92826 284 aaPredicted RBP11.51□□□□□ -0.57
COL8A1-201ENST00000261037 OR51B6Q9H340 312 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 SLC7A7Q9UM01 511 aa11.51□□□□□ -0.57
COL8A1-201ENST00000261037 OR5K4A6NMS3 321 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 DEFB133Q30KQ1 61 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 ALG10BQ5I7T1 473 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 CLLU1OSQ5K130 101 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 C6orf132Q5T0Z8 1188 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 SFRP4Q6FHJ7 346 aaPredicted RBP11.5□□□□□ -0.57
COL8A1-201ENST00000261037 SHISA6Q6ZSJ9 500 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 RELL1Q8IUW5 271 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 OR9A2Q8NGT5 310 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 TMEM68Q96MH6 324 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 UHRF1Q96T88 793 aaPredicted RBP11.5□□□□□ -0.57
COL8A1-201ENST00000261037 ARMC1Q9NVT9 282 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 CUEDC1Q9NWM3 386 aaPredicted RBP11.5□□□□□ -0.57
COL8A1-201ENST00000261037 CXXC1Q9P0U4 656 aaPredicted RBP11.5□□□□□ -0.57
COL8A1-201ENST00000261037 PCTPQ9UKL6 214 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 LIPT1Q9Y234 373 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 RNF215Q9Y6U7 377 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 A6NL46 340 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 ZNF705EA8MWA4 302 aaPredicted RBP11.5□□□□□ -0.57
COL8A1-201ENST00000261037 HRGP04196 525 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 HSD3B1P14060 373 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 DRD2P14416 443 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 IFNGR1P15260 489 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 PXNP49023 591 aaPredicted RBP11.5□□□□□ -0.57
COL8A1-201ENST00000261037 RSU1Q15404 277 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 ZNF829Q3KNS6 432 aaPredicted RBP11.5□□□□□ -0.57
COL8A1-201ENST00000261037 NDUFAF5Q5TEU4 345 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 DUS1LQ6P1R4 473 aaKnown RBP11.5□□□□□ -0.57
COL8A1-201ENST00000261037 ARHGAP11AQ6P4F7 1023 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 PRR18Q8N4B5 295 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 RPLP0P6Q8NHW5 317 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 FUBP1Q96AE4 644 aaKnown RBP11.5□□□□□ -0.57
COL8A1-201ENST00000261037 CREB3L1Q96BA8 519 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 TEPSINQ96N21 525 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 VRTNQ9H8Y1 702 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 SPO11Q9Y5K1 396 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 DNAJC15Q9Y5T4 150 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 AGAP5A6NIR3 686 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 CD68P34810 354 aaPredicted RBP11.5□□□□□ -0.57
COL8A1-201ENST00000261037 ZNF649Q9BS31 505 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 EIF5A2Q9GZV4 153 aaKnown RBP11.5□□□□□ -0.57
COL8A1-201ENST00000261037 SYT4Q9H2B2 425 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 MMP27Q9H306 513 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 PREBQ9HCU5 417 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 PTBP2Q9UKA9 531 aaKnown RBP11.5□□□□□ -0.57
COL8A1-201ENST00000261037 KCNIP3Q9Y2W7 256 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 CRYBG1Q9Y4K1 1723 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 GXYLT2A0PJZ3 443 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 GSTM2P28161 218 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 HOXA11P31270 313 aaPredicted RBP11.5□□□□□ -0.57
COL8A1-201ENST00000261037 POU4F2Q12837 409 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 ENDOVQ8N8Q3 282 aaKnown RBP11.5□□□□□ -0.57
COL8A1-201ENST00000261037 TUBA1CQ9BQE3 449 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 DPH1Q9BZG8 443 aa11.5□□□□□ -0.57
COL8A1-201ENST00000261037 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 SGK494L7N484 410 aa11.49□□□□□ -0.57
COL8A1-201ENST00000261037 PTGESO14684 152 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms