RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 UTS2RQ9UKP6 389 aa17.38■□□□□ 0.37
TM6SF1-201ENST00000258909 PSME2Q9UL46 239 aa17.38■□□□□ 0.37
TM6SF1-201ENST00000258909 ZNF780BQ9Y6R6 833 aa17.38■□□□□ 0.37
TM6SF1-201ENST00000258909 ANKHD1Q8IWZ3 2542 aaKnown RBP17.38■□□□□ 0.37
TM6SF1-201ENST00000258909 KRT6AP02538 564 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 KRT6BP04259 564 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 IL3P08700 152 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 FAM153BP0C7A2 387 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 PCSK2P16519 638 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 KRT6CP48668 564 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 RAE1P78406 368 aaKnown RBP17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 RASA2Q15283 850 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 SLC25A35Q3KQZ1 300 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 FAM153CQ494X1 144 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 ACSF3Q4G176 576 aaPredicted RBP17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 SCIMPQ6UWF3 145 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 ANGPTL8Q6UXH0 198 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 CCDC116Q8IYX3 515 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 HGDQ93099 445 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 CTHRC1Q96CG8 243 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 MTBPQ96DY7 904 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 LCORQ96JN0 433 aaPredicted RBP17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 KCNA7Q96RP8 456 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 ZNF382Q96SR6 550 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 ACPTQ9BZG2 426 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 GALNT9Q9HCQ5 603 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 CAMK2AQ9UQM7 478 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 CFL2Q9Y281 166 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 DLGAP4Q9Y2H0 992 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 L3MBTL1Q9Y468 752 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 TIMM22Q9Y584 194 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 PCDHGB3Q9Y5G1 929 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 MED13LQ71F56 2210 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 FAM47E-STBD1D6RA91 191 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 ULK1O75385 1050 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 IMPDH1P20839 514 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 BMP5P22003 454 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 ATP5F1P24539 256 aaPredicted RBP17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 HMOX2P30519 316 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 TRA2BP62995 288 aaKnown RBP17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 HMGCS1Q01581 520 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 BTKQ06187 659 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 PLCXD2Q0VAA5 305 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 DCST1Q5T197 706 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 CES4AQ5XG92 561 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 TIGD3Q6B0B8 471 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 ARSKQ6UWY0 536 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 TRMT10CQ7L0Y3 403 aaKnown RBP17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 YRDCQ86U90 279 aaKnown RBP17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 IFT20Q8IY31 132 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 RELL2Q8NC24 303 aaPredicted RBP17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 APIPQ96GX9 242 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 TMEM41AQ96HV5 264 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 TBK1Q9UHD2 729 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 MCM8Q9UJA3 840 aa17.37■□□□□ 0.37
TM6SF1-201ENST00000258909 HRNRQ86YZ3 2850 aaPredicted RBP17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 GNG14A0A1W2PPG7 69 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 HSPB2A8KAH6 182 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 AHRRA9YTQ3 701 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 PCDH7O60245 1069 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 ICOSLGO75144 302 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 UGT2B11O75310 529 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 ZWINTO95229 277 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 EPPINO95925 133 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 RHOXF2BP0C7M4 288 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 PYGBP11216 843 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 HSD3B1P14060 373 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 NAGAP17050 411 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 BMP7P18075 431 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 HSD3B2P26439 372 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 PTPN6P29350 595 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 UQCRC1P31930 480 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 PTGDSP41222 190 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 EMDP50402 254 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 PRKAA2P54646 552 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 CSTF3Q12996 717 aaKnown RBP17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 SLC29A2Q14542 456 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 TESK1Q15569 626 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 HSPB2Q16082 182 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 VASNQ6EMK4 673 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 NUP54Q7Z3B4 507 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 ZZZ3Q8IYH5 903 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 OR1J4Q8NGS1 313 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 KAT2AQ92830 837 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 EXOSC8Q96B26 276 aaKnown RBP17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 NTNG2Q96CW9 530 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 HSPBAP1Q96EW2 488 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 RHOXF2Q9BQY4 288 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 EBPLQ9BY08 206 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 UGT2B28Q9BY64 529 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 KLRF1Q9NZS2 232 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 MAPRE3Q9UPY8 281 aa17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 SETD2Q9BYW2 2564 aaPredicted RBP17.36■□□□□ 0.37
TM6SF1-201ENST00000258909 NAGLUP54802 743 aa17.35■□□□□ 0.37
TM6SF1-201ENST00000258909 ZNF628Q5EBL2 1059 aa17.35■□□□□ 0.37
TM6SF1-201ENST00000258909 GSPT2Q8IYD1 628 aaKnown RBP17.35■□□□□ 0.37
TM6SF1-201ENST00000258909 FAM83FQ8NEG4 500 aaPredicted RBP17.35■□□□□ 0.37
TM6SF1-201ENST00000258909 OR9A2Q8NGT5 310 aa17.35■□□□□ 0.37
TM6SF1-201ENST00000258909 TMBIM1Q969X1 311 aa17.35■□□□□ 0.37
TM6SF1-201ENST00000258909 TRIB1Q96RU8 372 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms