RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 MAP2K6P52564 334 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 LSM11P83369 360 aaKnown RBP eCLIP11.68□□□□□ -0.54
USP30-201ENST00000257548 GRM7Q14831 915 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 GPR33Q49SQ1 333 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 LYPLAL1Q5VWZ2 237 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 PODNL1Q6PEZ8 512 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 LRRN1Q6UXK5 716 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 RDH10Q8IZV5 341 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 OR4M1Q8NGD0 313 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 SMAP2Q8WU79 429 aaPredicted RBP11.68□□□□□ -0.54
USP30-201ENST00000257548 BRI3BPQ8WY22 251 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 NEIL2Q969S2 332 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 PKMYT1Q99640 499 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 RIOK2Q9BVS4 552 aaKnown RBP11.68□□□□□ -0.54
USP30-201ENST00000257548 GSX2Q9BZM3 304 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 ZCCHC2Q9C0B9 1178 aaKnown RBP11.68□□□□□ -0.54
USP30-201ENST00000257548 GABARAPL1Q9H0R8 117 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 MIXL1Q9H2W2 232 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 PCDHB16Q9NRJ7 776 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 TMEM45AQ9NWC5 275 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 TEX10Q9NXF1 929 aaPredicted RBP11.68□□□□□ -0.54
USP30-201ENST00000257548 PCDHB8Q9UN66 801 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 PADI2Q9Y2J8 665 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 MN1Q10571 1320 aaPredicted RBP11.68□□□□□ -0.54
USP30-201ENST00000257548 GTPBP1O00178 669 aaKnown RBP11.68□□□□□ -0.54
USP30-201ENST00000257548 PSMD9O00233 223 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 COCHO43405 550 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 RAF1P04049 648 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 PITPNBP48739 271 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 AP1S1P61966 158 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 SYPL1Q16563 259 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 SPIN4Q56A73 249 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 MEDAGQ5VYS4 303 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 SLC36A4Q6YBV0 504 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 Q6ZVU0 165 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 C6orf120Q7Z4R8 191 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 TMED4Q7Z7H5 227 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 KLK6Q92876 244 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 FBXW5Q969U6 566 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 DDX31Q9H8H2 851 aaKnown RBP11.68□□□□□ -0.54
USP30-201ENST00000257548 MED20Q9H944 212 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 BTNL2Q9UIR0 455 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 FBXW2Q9UKT8 454 aa11.68□□□□□ -0.54
USP30-201ENST00000257548 VCANP13611 3396 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 PAPPA2Q9BXP8 1791 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 A0A0U1RQF3 1178 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 TNFRSF10BO14763 440 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 S100A9P06702 114 aaKnown RBP11.67□□□□□ -0.54
USP30-201ENST00000257548 TRAPPC2P0DI81 140 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 TRAPPC2BP0DI82 140 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 GNSP15586 552 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 HLA-DMAP28067 261 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 PER3P56645 1201 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 WDR5P61964 334 aaKnown RBP11.67□□□□□ -0.54
USP30-201ENST00000257548 ARF5P84085 180 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 C4orf46Q504U0 113 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 C3P1Q6ZMU1 363 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 CPOQ8IVL8 374 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 OR8K3Q8NH51 312 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 SLC6A16Q9GZN6 736 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 B4GALT6Q9UBX8 382 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 FLVCR2Q9UPI3 526 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 AK6Q9Y3D8 172 aaKnown RBP11.67□□□□□ -0.54
USP30-201ENST00000257548 TOR1AO14656 332 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 SLC43A1O75387 559 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 IGLV3-25P01717 112 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 FGBP02675 491 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 GYPBP06028 91 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 UCHL1P09936 223 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 IDSP22304 550 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 GMFBP60983 142 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 PLK5Q496M5 336 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 IKBIPQ70UQ0 350 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 ATCAYQ86WG3 371 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 GPR135Q8IZ08 494 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 NANOGP1Q8N7R0 232 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 UPF1Q92900 1129 aaKnown RBP eCLIP11.67□□□□□ -0.54
USP30-201ENST00000257548 F2RL3Q96RI0 385 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 IFT27Q9BW83 186 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 POT1Q9NUX5 634 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 A0A0B4J293 547 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.67□□□□□ -0.54
USP30-201ENST00000257548 MYADML2A6NDP7 307 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 PDCD5O14737 125 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 ARPC1BO15143 372 aaKnown RBP11.67□□□□□ -0.54
USP30-201ENST00000257548 HYAL3O43820 417 aaPredicted RBP11.67□□□□□ -0.54
USP30-201ENST00000257548 TCRBP04435 133 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 SNRPBP14678 240 aaKnown RBP11.67□□□□□ -0.54
USP30-201ENST00000257548 ETV3P41162 512 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 STAT5AP42229 794 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 AKR1C2P52895 323 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 AP1S2P56377 157 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 AKR1C1Q04828 323 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 ZNF385BQ569K4 471 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 TCTE3Q8IZS6 198 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 CMTM8Q8IZV2 173 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 CLDN22Q8N7P3 220 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 OR8S1Q8NH09 359 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 PIGXQ8TBF5 258 aa11.67□□□□□ -0.54
USP30-201ENST00000257548 RNF31Q96EP0 1072 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms