RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 EQTNQ9NQ60 294 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 GPR173Q9NS66 373 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 INTS6Q9UL03 887 aaKnown RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 CAMK2AQ9UQM7 478 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 FAM96BQ9Y3D0 163 aa6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 COL16A1Q07092 1604 aaPredicted RBP6.45□□□□□ -1.38
PDGFRA-201ENST00000257290 TPP1O14773 563 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 COCHO43405 550 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 PRKYO43930 277 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 PDYNP01213 254 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 HCKP08631 526 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 ACAA1P09110 424 aaPredicted RBP6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 HTR2CP28335 458 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 RAB7AP51149 207 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 TGM3Q08188 693 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 SAMD13Q5VXD3 122 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 OR52W1Q6IF63 320 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 DBX2Q6ZNG2 339 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 GDPGP1Q6ZNW5 385 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 HPSE2Q8WWQ2 592 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 FAM3CQ92520 227 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 SMARCD2Q92925 531 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 MOAP1Q96BY2 351 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 ZBTB20Q9HC78 741 aaPredicted RBP6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 GALNT9Q9HCQ5 603 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 RYDENQ9NUL5 291 aaKnown RBP6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 GAB2Q9UQC2 676 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 TP53TG5Q9Y2B4 290 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 LOC105369274A0A096LPK9 316 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 ZNF891A8MT65 544 aaPredicted RBP6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 ITGB1BP1O14713 200 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 FSCN2O14926 492 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 ENTPD6O75354 484 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 SLC22A3O75751 556 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 DDNO94850 711 aaPredicted RBP6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 TMEM63AO94886 807 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 HOXC6P09630 235 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 ACO1P21399 889 aaKnown RBP6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 ADORA2AP29274 412 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 ATP5IP56385 69 aaPredicted RBP6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 TNK1Q13470 666 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 MOGAT2Q3SYC2 334 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 GOLGA7Q7Z5G4 137 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 OR4N4Q8N0Y3 316 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 SLC44A3Q8N4M1 653 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 COMMD1Q8N668 190 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 LPPQ93052 612 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 PNMA5Q96PV4 448 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 MCOLN1Q9GZU1 580 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 SLC5A7Q9GZV3 580 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 MTIF3Q9H2K0 278 aaKnown RBP6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 SEC14L3Q9UDX4 400 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 PCDHB10Q9UN67 800 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 PCDHB9Q9Y5E1 797 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 A8MXE2 369 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 SOX15O60248 233 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 KLF8O95600 359 aaPredicted RBP6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 SNHG28P0DPA3 235 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 PRKACGP22612 351 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 CDH12P55289 794 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 ERVFRD-1P60508 538 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 ATXN7L3Q14CW9 347 aaPredicted RBP6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 MICAQ29983 383 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 DCAF4L1Q3SXM0 396 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 ELOA3BQ3SY89 546 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 GHDCQ8N2G8 530 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 ELOA3Q8NG57 546 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 OR2T12Q8NG77 320 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 MALSU1Q96EH3 234 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 FOXN4Q96NZ1 517 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 CPNE1Q99829 537 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 C11orf54Q9H0W9 315 aaPredicted RBP6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 PISDQ9UG56 409 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 CORO2BQ9UQ03 480 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 CICQ96RK0 1608 aaPredicted RBP6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 A0A0B4J293 547 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 GGT3PA6NGU5 568 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 PRRG1O14668 218 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 ARPC2O15144 300 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 TBX19O60806 448 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 RDH16O75452 317 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 ADRB3P13945 408 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 MAOAP21397 527 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 GGT2P36268 569 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 ZNF41P51814 821 aaPredicted RBP6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 SNTB2Q13425 540 aaKnown RBP6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 ZACNQ401N2 412 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 NKAIN1Q4KMZ8 207 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 LIPMQ5VYY2 423 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 SLC39A4Q6P5W5 647 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 CCDC190Q86UF4 302 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 ZNF511Q8NB15 262 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 PHOSPHO1Q8TCT1 267 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 REEP6Q96HR9 211 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 PCDHB18PQ96TA0 734 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 SPATC1LQ9H0A9 340 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 ZCCHC4Q9H5U6 513 aa6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 METTL17Q9H7H0 456 aaPredicted RBP6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.44□□□□□ -1.38
PDGFRA-201ENST00000257290 ASAH2Q9NR71 780 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms