RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 TEX261Q6UWH6 196 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 VRK3Q8IV63 474 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 OR52I1Q8NGK6 324 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 HUS1BQ8NHY5 278 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 STOML3Q8TAV4 291 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 ASB11Q8WXH4 323 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 COQ10AQ96MF6 247 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 SLC38A2Q96QD8 506 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 RBCK1Q9BYM8 510 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 SEC14L3Q9UDX4 400 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 U3KQ87 197 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 LGI1O95970 557 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 DBIP07108 87 aaKnown RBP8.78□□□□□ -1
SRSF6-201ENST00000244020 ZNF250P15622 560 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 SERPINA4P29622 427 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 PBLDP30039 288 aaPredicted RBP8.78□□□□□ -1
SRSF6-201ENST00000244020 TIA1P31483 386 aaKnown RBP eCLIP8.78□□□□□ -13e-53■■□□□ 12.9
SRSF6-201ENST00000244020 CAPZA1P52907 286 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 PER3P56645 1201 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 FGL1Q08830 312 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 ILKQ13418 452 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 CCL14Q16627 93 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 PUS10Q3MIT2 529 aaKnown RBP8.78□□□□□ -1
SRSF6-201ENST00000244020 IER5LQ5T953 404 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 LIX1LQ8IVB5 337 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 POGLUT1Q8NBL1 392 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 GPR26Q8NDV2 337 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 RAB8BQ92930 207 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 TMEM43Q9BTV4 400 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 QRSL1Q9H0R6 528 aaKnown RBP8.78□□□□□ -1
SRSF6-201ENST00000244020 PPA2Q9H2U2 334 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 SLC25A19Q9HC21 320 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 NIT2Q9NQR4 276 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 NUDT15Q9NV35 164 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 GPR52Q9Y2T5 361 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 DNAH12Q6ZR08 3092 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 C2orf92A0A1B0GVN3 265 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 A8MVJ9 347 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 C1orf196B1AJZ1 125 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 PRAMEF4O60810 478 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 TXNDC12O95881 172 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 FAUP35544 74 aaKnown RBP8.78□□□□□ -1
SRSF6-201ENST00000244020 GJA5P36382 358 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 SMIM11AP58511 58 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 TAS2R50P59544 299 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 ZNF763Q0D2J5 394 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 PRAMEF9Q5VWM5 478 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 HIST2H2AA3Q6FI13 130 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 LAMTOR1Q6IAA8 161 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 SLC25A25Q6KCM7 469 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 B3GLCTQ6Y288 498 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 CPA6Q8N4T0 437 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 ESX1Q8N693 406 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 DUSP18Q8NEJ0 188 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 OR2T35Q8NGX2 323 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.78□□□□□ -12e-8■■■□□ 15.3
SRSF6-201ENST00000244020 OR2S2Q9NQN1 319 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 REV1Q9UBZ9 1251 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 FARSAQ9Y285 508 aaKnown RBP8.78□□□□□ -1
SRSF6-201ENST00000244020 LSM2Q9Y333 95 aaKnown RBP8.78□□□□□ -1
SRSF6-201ENST00000244020 DOCK4Q8N1I0 1966 aa8.78□□□□□ -1
SRSF6-201ENST00000244020 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.77□□□□□ -1
SRSF6-201ENST00000244020 C5orf51A6NDU8 294 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 PRAMEF25A6NGN4 478 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 CD8B2A6NJW9 211 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 SLC38A8A6NNN8 435 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 AKAP8O43823 692 aaKnown RBP8.77□□□□□ -1
SRSF6-201ENST00000244020 PRKYO43930 277 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 HLA-DPB1P04440 258 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 CD8BP10966 210 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 CBR1P16152 277 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 CPEP16870 476 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 CSKP41240 450 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 TPGS1Q6ZTW0 290 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 TMED4Q7Z7H5 227 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 GLRX5Q86SX6 157 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 SLITRK4Q8IW52 837 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.77□□□□□ -1
SRSF6-201ENST00000244020 TMEM163Q8TC26 289 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 SLC16A10Q8TF71 515 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 TMEM159Q96B96 161 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 CREB3L1Q96BA8 519 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 TBX5Q99593 518 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 ZNF649Q9BS31 505 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 MARVELD1Q9BSK0 173 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 SORBS1Q9BX66 1292 aaKnown RBP8.77□□□□□ -1
SRSF6-201ENST00000244020 OR51B5Q9H339 312 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 DPAGT1Q9H3H5 408 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 ENAMQ9NRM1 1142 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 ACTR10Q9NZ32 417 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 LHX3Q9UBR4 397 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 PRKAG2Q9UGJ0 569 aa8.77□□□□□ -1
SRSF6-201ENST00000244020 LOC105369274A0A096LPK9 316 aa8.77□□□□□ -1.01
SRSF6-201ENST00000244020 A0A0A6YYJ9 748 aa8.77□□□□□ -1.01
SRSF6-201ENST00000244020 OR6C65A6NJZ3 312 aa8.77□□□□□ -1.01
SRSF6-201ENST00000244020 ETHE1O95571 254 aa8.77□□□□□ -1.01
SRSF6-201ENST00000244020 ZNF30P17039 623 aa8.77□□□□□ -1.01
SRSF6-201ENST00000244020 PSMA3P25788 255 aa8.77□□□□□ -1.01
SRSF6-201ENST00000244020 ZNF628Q5EBL2 1059 aa8.77□□□□□ -1.01
SRSF6-201ENST00000244020 MED27Q6P2C8 311 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms