RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 HIST1H2ABP04908 130 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 S100A3P33764 101 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 CD79BP40259 229 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 CDH12P55289 794 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 SCAPQ12770 1279 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 PDZK1IP1Q13113 114 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 OR5M10Q6IEU7 315 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 SLC30A6Q6NXT4 461 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 HIST3H2AQ7L7L0 130 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 HIST1H2ACQ93077 130 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 FATE1Q969F0 183 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 AARSD1Q9BTE6 412 aaKnown RBP12.33□□□□□ -0.44
MSH2-201ENST00000233146 FKBPLQ9UIM3 349 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 PIAS3Q9Y6X2 628 aa12.33□□□□□ -0.44
MSH2-201ENST00000233146 TLR4O00206 839 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 PPEF2O14830 753 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 PRKYO43930 277 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 NIPSNAP2O75323 286 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 ADH1CP00326 375 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 IGF2P01344 180 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 THP07101 528 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 GPX2P18283 190 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 ADCYAP1P18509 176 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 VEZF1Q14119 521 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 SGO1Q5FBB7 561 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 OAFQ86UD1 273 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 TOMM5Q8N4H5 51 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 CHST14Q8NCH0 376 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 WNT8BQ93098 351 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 NTAN1Q96AB6 310 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 ISYNA1Q9NPH2 558 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 CA10Q9NS85 328 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 TSC2P49815 1807 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 C2orf78A6NCI8 922 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 ARPC5O15511 151 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 GATBO75879 557 aaKnown RBP12.32□□□□□ -0.44
MSH2-201ENST00000233146 NUDT7P0C024 238 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 WNT4P56705 351 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 RAB8AP61006 207 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 SPIBQ01892 262 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 EEF1DP3Q658K8 133 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 MOB3CQ70IA8 216 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 MISPQ8IVT2 679 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 SLITRK4Q8IW52 837 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 GNPDA2Q8TDQ7 276 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 DPH2Q9BQC3 489 aaPredicted RBP12.32□□□□□ -0.44
MSH2-201ENST00000233146 DOHHQ9BU89 302 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 RASL12Q9NYN1 266 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 FEM1BQ9UK73 627 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 FNDC3AQ9Y2H6 1198 aaKnown RBP12.32□□□□□ -0.44
MSH2-201ENST00000233146 ANKRD36A6QL64 1941 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 CLIC1O00299 241 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 OR7A17O14581 309 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 RGS14O43566 566 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 BPIFB3P59826 476 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 SUPT20HL1Q3ZLR7 823 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 C10orf91Q5T1B1 145 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 ARRDC1Q8N5I2 433 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 FAM71CQ8NEG0 241 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 OR52I1Q8NGK6 324 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 SP7Q8TDD2 431 aaPredicted RBP12.32□□□□□ -0.44
MSH2-201ENST00000233146 SELENOMQ8WWX9 145 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 VOPP1Q96AW1 172 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 WDR89Q96FK6 387 aaPredicted RBP12.32□□□□□ -0.44
MSH2-201ENST00000233146 MTG2Q9H4K7 406 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 TCF7L1Q9HCS4 588 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 SARS2Q9NP81 518 aaKnown RBP12.32□□□□□ -0.44
MSH2-201ENST00000233146 NDOR1Q9UHB4 597 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 LHX6Q9UPM6 363 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 DOCK1Q14185 1865 aa12.32□□□□□ -0.44
MSH2-201ENST00000233146 NUP214P35658 2090 aaPredicted RBP12.31□□□□□ -0.44
MSH2-201ENST00000233146 PRAF2O60831 178 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 SCN2BO60939 215 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 RECQL4O94761 1208 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 EIF4EP06730 217 aaKnown RBP12.31□□□□□ -0.44
MSH2-201ENST00000233146 GP1BAP07359 652 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 PRG2P13727 222 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 CTNNB1P35222 781 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 FAM189BP81408 668 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 FABP9Q0Z7S8 132 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 KCNAB1Q14722 419 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 UAP1L1Q3KQV9 507 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 ARIH2OSQ8N7S6 290 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 KLRG1Q96E93 195 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 LURAP1Q96LR2 239 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 C20orf85Q9H1P6 137 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 OPA3Q9H6K4 179 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 PARP14Q460N5 1801 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 E9PI62 339 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 RFXANKO14593 260 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 MID1O15344 667 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 CNR1P21554 472 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 DRD5P21918 477 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 WNT3AP56704 352 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 TMEM132BQ14DG7 1078 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 CDNFQ49AH0 187 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 CEACAM20Q6UY09 585 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 FAM122BQ7Z309 247 aa12.31□□□□□ -0.44
MSH2-201ENST00000233146 WDR53Q7Z5U6 358 aaPredicted RBP12.31□□□□□ -0.44
MSH2-201ENST00000233146 OR6K3Q8NGY3 331 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms