RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 TMCO6Q96DC7 493 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 TREX2Q9BQ50 279 aaPredicted RBP23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 TEX101Q9BY14 249 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 CHRDQ9H2X0 955 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 C11orf16Q9NQ32 467 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 LHX9Q9NQ69 397 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 NDUFB11Q9NX14 153 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 DIMT1Q9UNQ2 313 aaKnown RBP23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 M0R129 80 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 GUCY1B2O75343 617 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 TRIM23P36406 574 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 RORCP51449 518 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 OR4C11Q6IEV9 310 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 IL4I1Q96RQ9 567 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 ASPNQ9BXN1 380 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 RNF167Q9H6Y7 350 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 WDR26Q9H7D7 661 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 ISYNA1Q9NPH2 558 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 MRPS18AQ9NVS2 196 aaKnown RBP23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 PLAGL1Q9UM63 463 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 A4GNTQ9UNA3 340 aa23.47■■□□□ 1.35
RUNDC3A-201ENST00000225441 A0A0A6YYD5 115 aa23.46■■□□□ 1.35
RUNDC3A-201ENST00000225441 ZNF670-ZNF695F2Z2N8 137 aa23.46■■□□□ 1.35
RUNDC3A-201ENST00000225441 H3BN98 237 aa23.46■■□□□ 1.35
RUNDC3A-201ENST00000225441 CASC3O15234 703 aaKnown RBP23.46■■□□□ 1.35
RUNDC3A-201ENST00000225441 ASNA1O43681 348 aa23.46■■□□□ 1.35
RUNDC3A-201ENST00000225441 IGFALSP35858 605 aa23.46■■□□□ 1.35
RUNDC3A-201ENST00000225441 RPS26P62854 115 aaKnown RBP23.46■■□□□ 1.35
RUNDC3A-201ENST00000225441 ZNF91Q05481 1191 aa23.46■■□□□ 1.35
RUNDC3A-201ENST00000225441 CD300CQ08708 224 aa23.46■■□□□ 1.35
RUNDC3A-201ENST00000225441 DMPKQ09013 629 aa23.46■■□□□ 1.35
RUNDC3A-201ENST00000225441 HSPB3Q12988 150 aa23.46■■□□□ 1.35
RUNDC3A-201ENST00000225441 SOWAHCQ53LP3 525 aaPredicted RBP23.46■■□□□ 1.35
RUNDC3A-201ENST00000225441 DEF8Q6ZN54 512 aa23.46■■□□□ 1.35
RUNDC3A-201ENST00000225441 NLGN4XQ8N0W4 816 aa23.46■■□□□ 1.35
RUNDC3A-201ENST00000225441 FAM83FQ8NEG4 500 aaPredicted RBP23.46■■□□□ 1.35
RUNDC3A-201ENST00000225441 HTRA1Q92743 480 aa23.46■■□□□ 1.35
RUNDC3A-201ENST00000225441 ACAT2Q9BWD1 397 aa23.46■■□□□ 1.35
RUNDC3A-201ENST00000225441 RAB11FIP5Q9BXF6 653 aa23.46■■□□□ 1.35
RUNDC3A-201ENST00000225441 SMURF1Q9HCE7 757 aa23.46■■□□□ 1.35
RUNDC3A-201ENST00000225441 QPCTLQ9NXS2 382 aa23.46■■□□□ 1.35
RUNDC3A-201ENST00000225441 TAS2R16Q9NYV7 291 aa23.46■■□□□ 1.35
RUNDC3A-201ENST00000225441 TMEM98Q9Y2Y6 226 aa23.46■■□□□ 1.35
RUNDC3A-201ENST00000225441 NUMA1Q14980 2115 aa23.46■■□□□ 1.35
RUNDC3A-201ENST00000225441 A0A1W2PPV9 198 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 HYKKA2RU49 373 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 SNTNA6NMZ2 147 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 RTCAO00442 366 aaKnown RBP23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 SLC31A1O15431 190 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 B4GALT2O60909 372 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 SEMA7AO75326 666 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 CSO75390 466 aaKnown RBP23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 KCNK2O95069 426 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 SEMA4FO95754 770 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 SEPHS1P49903 392 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 KLHL22Q53GT1 634 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 ENTPD8Q5MY95 495 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 SLC34A3Q8N130 599 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 SPEM1Q8N4L4 309 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 RAB8BQ92930 207 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 EXOSC8Q96B26 276 aaKnown RBP23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 CAMK1GQ96NX5 476 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 FNDC11Q9BVV2 318 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 TSSK6Q9BXA6 273 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 LGR4Q9BXB1 951 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 ROGDIQ9GZN7 287 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 CUEDC1Q9NWM3 386 aaPredicted RBP23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 SSR3Q9UNL2 185 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 CYP8B1Q9UNU6 501 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 KLHL20Q9Y2M5 609 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 GRIP1Q9Y3R0 1128 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 TMPRSS11DO60235 418 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 NME6O75414 186 aaPredicted RBP23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 LGI1O95970 557 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 ADRA2AP08913 450 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 SLC35G4P0C7Q5 338 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 FUT4P22083 530 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 NTSP30990 170 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 PCYT1AP49585 367 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 TARDBPQ13148 414 aaKnown RBP eCLIP23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 UBE3DQ7Z6J8 389 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 SLC7A13Q8TCU3 470 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 PHPT1Q9NRX4 125 aaPredicted RBP23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 SLC23A2Q9UGH3 650 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 OR1A2Q9Y585 309 aa23.45■■□□□ 1.34
RUNDC3A-201ENST00000225441 A0A0G2JPF8 293 aa23.44■■□□□ 1.34
RUNDC3A-201ENST00000225441 IQCMA0A1B0GVH7 501 aa23.44■■□□□ 1.34
RUNDC3A-201ENST00000225441 HNRNPCL2B2RXH8 293 aa23.44■■□□□ 1.34
RUNDC3A-201ENST00000225441 C10orf142B7Z368 130 aa23.44■■□□□ 1.34
RUNDC3A-201ENST00000225441 HNRNPCL3B7ZW38 293 aa23.44■■□□□ 1.34
RUNDC3A-201ENST00000225441 DYRK3O43781 588 aa23.44■■□□□ 1.34
RUNDC3A-201ENST00000225441 TP53P04637 393 aaPredicted RBP23.44■■□□□ 1.34
RUNDC3A-201ENST00000225441 HNRNPCL4P0DMR1 293 aa23.44■■□□□ 1.34
RUNDC3A-201ENST00000225441 NR2F1P10589 423 aa23.44■■□□□ 1.34
RUNDC3A-201ENST00000225441 GTF2E2P29084 291 aaKnown RBP23.44■■□□□ 1.34
RUNDC3A-201ENST00000225441 CRYBB2P43320 205 aa23.44■■□□□ 1.34
RUNDC3A-201ENST00000225441 TPTEP56180 551 aa23.44■■□□□ 1.34
RUNDC3A-201ENST00000225441 TP53BP2Q13625 1128 aa23.44■■□□□ 1.34
RUNDC3A-201ENST00000225441 ATAD3BQ5T9A4 648 aa23.44■■□□□ 1.34
RUNDC3A-201ENST00000225441 C1orf94Q6P1W5 598 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms