RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 NOP16Q9Y3C1 178 aaKnown RBP11.55□□□□□ -0.56
TSPAN9-201ENST00000011898 APC2O95996 2303 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 TO15178 435 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 HCN1O60741 890 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 FMO6PO60774 539 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 HRGP04196 525 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 SRCP12931 536 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 CTSEP14091 401 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 POLR2IP36954 125 aaKnown RBP11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 CCR8P51685 355 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 EIF5AP63241 154 aaKnown RBP11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 KCNC4Q03721 635 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 KCNC3Q14003 757 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 PTPRRQ15256 657 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 SHQ1Q6PI26 577 aaKnown RBP11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 KIAA1324Q6UXG2 1013 aaKnown RBP11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 SLC30A8Q8IWU4 369 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 SAMD14Q8IZD0 417 aaPredicted RBP11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 ARMC10Q8N2F6 343 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 SLC22A17Q8WUG5 538 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 EGLN2Q96KS0 407 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 RTP3Q9BQQ7 232 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 OR51V1Q9H2C8 321 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 PLAC1Q9HBJ0 212 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 HEBP1Q9NRV9 189 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 MMP20O60882 483 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 SEC14L2O76054 403 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 VAMP1P23763 118 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 AVPR1BP47901 424 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 CLCNKAP51800 687 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 BIKQ13323 160 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 SMN1Q16637 294 aaKnown RBP11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 PAPD4Q6PIY7 484 aaKnown RBP11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 Q6ZSR9 355 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 PARGQ86W56 976 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 GALNT13Q8IUC8 556 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 SLC22A15Q8IZD6 547 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 GJD3Q8N144 294 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 SDR16C5Q8N3Y7 309 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 OR9A1PQ8NGU1 263 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 DNASE1L2Q92874 299 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 TMEM80Q96HE8 168 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 OR51J1Q9H342 316 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 DCAF13Q9NV06 445 aaKnown RBP11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 TMEM45AQ9NWC5 275 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 P2RX2Q9UBL9 471 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 NDOR1Q9UHB4 597 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 ZNF225Q9UK10 706 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 INSL6Q9Y581 213 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 ASXL3Q9C0F0 2248 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 TMEM189-UBE2V1I3L0A0 370 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 SLC31A1O15431 190 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 TFP02787 698 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 ACP5P13686 325 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 HOXD9P28356 352 aaPredicted RBP11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 ZSWIM9Q86XI8 627 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 LACC1Q8IV20 430 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 C2CD4CQ8TF44 421 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 GLYATL1Q969I3 302 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 PELOQ9BRX2 385 aaKnown RBP11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 CRB3Q9BUF7 120 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 RGCCQ9H4X1 137 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 NIPAL2Q9H841 368 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 C14orf105Q9NVL8 296 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 ASF1BQ9NVP2 202 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 GPRC5BQ9NZH0 403 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 MARK1Q9P0L2 795 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 UPB1Q9UBR1 384 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 GRXCR2A6NFK2 248 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 TNFRSF10BO14763 440 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 AKR7A2O43488 359 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 TIA1P31483 386 aaKnown RBP eCLIP11.54□□□□□ -0.561e-8■□□□□ 8.9
TSPAN9-201ENST00000011898 CD79BP40259 229 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 CBX5P45973 191 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 RHEBQ15382 184 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 ZFP41Q8N8Y5 198 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 RGMAQ96B86 450 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 CALML5Q9NZT1 146 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 COPS3Q9UNS2 423 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 PCDHA9Q9Y5H5 950 aa11.54□□□□□ -0.56
TSPAN9-201ENST00000011898 ETFAP13804 333 aa11.53□□□□□ -0.56
TSPAN9-201ENST00000011898 MAT2AP31153 395 aaKnown RBP11.53□□□□□ -0.56
TSPAN9-201ENST00000011898 HOXC13P31276 330 aa11.53□□□□□ -0.56
TSPAN9-201ENST00000011898 GRK5P34947 590 aa11.53□□□□□ -0.56
TSPAN9-201ENST00000011898 SPINT3P49223 89 aa11.53□□□□□ -0.56
TSPAN9-201ENST00000011898 COL28A1Q2UY09 1125 aa11.53□□□□□ -0.56
TSPAN9-201ENST00000011898 AKR1C8PQ5T2L2 129 aa11.53□□□□□ -0.56
TSPAN9-201ENST00000011898 CNIH2Q6PI25 160 aa11.53□□□□□ -0.56
TSPAN9-201ENST00000011898 FAM220AQ7Z4H9 259 aa11.53□□□□□ -0.56
TSPAN9-201ENST00000011898 ZFP82Q8N141 532 aa11.53□□□□□ -0.56
TSPAN9-201ENST00000011898 TEX26Q8N6G2 289 aa11.53□□□□□ -0.56
TSPAN9-201ENST00000011898 ZNF454Q8N9F8 522 aa11.53□□□□□ -0.56
TSPAN9-201ENST00000011898 FAM46DQ8NEK8 389 aa11.53□□□□□ -0.56
TSPAN9-201ENST00000011898 LCN9Q8WX39 176 aa11.53□□□□□ -0.56
TSPAN9-201ENST00000011898 MUL1Q969V5 352 aa11.53□□□□□ -0.56
TSPAN9-201ENST00000011898 ZNF649Q9BS31 505 aa11.53□□□□□ -0.56
TSPAN9-201ENST00000011898 SLC12A9Q9BXP2 914 aa11.53□□□□□ -0.56
TSPAN9-201ENST00000011898 RSPH9Q9H1X1 276 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms